GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for bcrB (ATP-dependent benzoyl-CoA reductase, beta subunit) in L-phenylalanine catabolism

Or see other characterized proteins similar to bcrB

Or see all steps for L-phenylalanine catabolism

Or cluster curated proteins matching a keyword

Definition of bcrB

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 432-436 amino acids (heteromeric)

The first sequence in each cluster is the seed.

O07461 benzoyl-CoA reductase (EC 1.3.7.8) from Rhodopseudomonas palustris
O07461 BadE (EC 1.3.7.8) from Rhodopseudomonas palustris
PFams: HGD-D
Heteromeric, 436 amino acids: PaperBLAST, CDD, Compare to cluster

BCRB_THAAR / O87875 Benzoyl-CoA reductase subunit B; 3-hydroxybenzoyl-CoA reductase subunit beta; EC 1.3.7.8; EC 1.3.99.n1 from Thauera aromatica
O87875 benzoyl-CoA reductase β subunit (EC 1.3.7.8) from Thauera aromatica
PFams: HGD-D
Heteromeric, 432 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

Q8VUG2 benzoyl-CoA reductase (EC 1.3.7.8) from Azoarcus evansii
PFams: HGD-D
434 amino acids: PaperBLAST, CDD