GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for iorAB (phenylpyruvate:ferredoxin oxidoreductase, fused IorA/IorB) in L-phenylalanine catabolism

Or see other characterized proteins similar to iorAB

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Definition of iorAB

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 1140-1195 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

I7EJ57 Indolepyruvate oxidoreductase
1140 amino acids: PaperBLAST, CDD, Compare to cluster

BPHYT_RS02015 phenylpyruvate ferredoxin oxidoreductase (EC 1.2.7.8) from Burkholderia phytofirmans PsJN
PFams: POR
1195 amino acids: PaperBLAST, CDD, Compare to cluster

HP15_859 phenylpyruvate ferredoxin oxidoreductase (EC 1.2.7.8) from Marinobacter adhaerens HP15
PFams: POR
1172 amino acids: PaperBLAST, CDD, Compare to cluster