GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to padF

Finding the characterized proteins for padF (phenylglyoxylate dehydrogenase, delta subunit) in L-phenylalanine catabolism

Or see clustering for step padF

Or see all steps for L-phenylalanine catabolism

Or cluster curated proteins matching a keyword

Definition of padF

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 6 other characterized sequences. (Found 7 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for padF.)

P80524 pyruvate synthase (subunit 1/4) (EC 1.2.7.1) from Methanosarcina barkeri
PFams: Fer4, Fer4_21, Fer4_7, Fer4_9, Fer4_6, Fer4
Heteromeric, 95 amino acids: PaperBLAST, CDD, BRENDA::P80524
40% identical to

PADF_AZOEV / Q8L3B2 NADH-dependent phenylglyoxylate dehydrogenase subunit delta; Phenylglyoxylate:NAD oxidoreductase; Phenylglyoxylate:acceptor oxidoreductase; EC 1.2.1.58 from Azoarcus evansii
PFams: Fer4
Heteromeric, 93 amino acids: PaperBLAST, CDD

Q51803 pyruvate synthase (subunit 2/4) (EC 1.2.7.1) from Pyrococcus furiosus
PFams: Fer4_6, Fer4, Fer4_21, Fer4_4, Fer4_7, Fer4, Fer4_6, Fer4_4
Heteromeric, 105 amino acids: PaperBLAST, CDD, BRENDA::Q51803
45% identical to

PADF_AZOEV / Q8L3B2 NADH-dependent phenylglyoxylate dehydrogenase subunit delta; Phenylglyoxylate:NAD oxidoreductase; Phenylglyoxylate:acceptor oxidoreductase; EC 1.2.1.58 from Azoarcus evansii
PFams: Fer4
Heteromeric, 93 amino acids: PaperBLAST, CDD

P56815 pyruvate synthase subunit δ (EC 1.2.7.1) from Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
PFams: Fer4, Fer4_10, Fer4_21, Fer4
Heteromeric, 81 amino acids: PaperBLAST, CDD, metacyc::MONOMER-14532
44% identical to

PADF_AZOEV / Q8L3B2 NADH-dependent phenylglyoxylate dehydrogenase subunit delta; Phenylglyoxylate:NAD oxidoreductase; Phenylglyoxylate:acceptor oxidoreductase; EC 1.2.1.58 from Azoarcus evansii
PFams: Fer4
Heteromeric, 93 amino acids: PaperBLAST, CDD

OORD_MOOTA / Q2RI40 Oxalate oxidoreductase subunit delta; OOR delta subunit; EC 1.2.7.10 from Moorella thermoacetica (strain ATCC 39073 / JCM 9320)
PFams: POR, Fer4, Fer4_6
Heteromeric, 315 amino acids: PaperBLAST, CDD, SwissProt::Q2RI40
44% identical to

PADF_AZOEV / Q8L3B2 NADH-dependent phenylglyoxylate dehydrogenase subunit delta; Phenylglyoxylate:NAD oxidoreductase; Phenylglyoxylate:acceptor oxidoreductase; EC 1.2.1.58 from Azoarcus evansii
PFams: Fer4
Heteromeric, 93 amino acids: PaperBLAST, CDD

Q5JIJ8 pyruvate synthase (subunit 3/3) (EC 1.2.7.1) from Thermococcus kodakarensis
PFams: Fer4_6, Fer4, Fer4_21, Fer4_4, Fer4_7, Fer4, Fer4_6, Fer4_4
Heteromeric, 105 amino acids: PaperBLAST, CDD, BRENDA::Q5JIJ8
44% identical to

PADF_AZOEV / Q8L3B2 NADH-dependent phenylglyoxylate dehydrogenase subunit delta; Phenylglyoxylate:NAD oxidoreductase; Phenylglyoxylate:acceptor oxidoreductase; EC 1.2.1.58 from Azoarcus evansii
PFams: Fer4
Heteromeric, 93 amino acids: PaperBLAST, CDD

W8CR61 pyruvate synthase (subunit 1/4) (EC 1.2.7.1); pyruvate decarboxylase (subunit 1/4) (EC 4.1.1.1) from Thermococcus guaymasensis
PFams: Fer4_6, Fer4, Fer4_21, Fer4_4, Fer4_7, Fer4, Fer4_6, Fer4_4
Heteromeric, 105 amino acids: PaperBLAST, CDD, BRENDA::W8CR61
42% identical to

PADF_AZOEV / Q8L3B2 NADH-dependent phenylglyoxylate dehydrogenase subunit delta; Phenylglyoxylate:NAD oxidoreductase; Phenylglyoxylate:acceptor oxidoreductase; EC 1.2.1.58 from Azoarcus evansii
PFams: Fer4
Heteromeric, 93 amino acids: PaperBLAST, CDD