GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for AAT20.2 (proline transporter) in L-proline catabolism

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Definition of AAT20.2

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by cluster

Leishmania infantum

TC 2.A.18.7.4 / A4HUI4 Proline/alanine transporter of 488 aas and 10 TMSs, AAP24. The first 18 amino acids of the negatively charged N-terminal LdAAP24 tail are required for alanine transport and may facilitate the electrostatic interactions of the entire negatively charged N-terminal tail with the positively charged internal loops in the transmembrane domain from Leishmania infantum
PFams: Aa_trans
488 amino acids: PaperBLAST, CDD (Singleton 1)