GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for HSERO_RS00890 (proline ABC transporter, permease component 2) in L-proline catabolism

Or see other characterized proteins similar to HSERO_RS00890

Or see all steps for L-proline catabolism

Or cluster curated proteins matching a keyword

Definition of HSERO_RS00890

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 358-404 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

A0A165KER0 ABC transporter ATP-binding protein
358 amino acids: PaperBLAST, CDD, Compare to cluster

D8IUY5 ABC-type branched-chain amino acid transport system, permease component protein
404 amino acids: PaperBLAST, CDD, Compare to cluster