GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for aapJ (ABC transporter for amino acids (Asp/Asn/Glu/Pro/Leu), substrate-binding component AapJ) in L-proline catabolism

Or see other characterized proteins similar to aapJ

Or see all steps for L-proline catabolism

Or search by keyword

Definition of aapJ

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (1/1 heteromeric)

TC 3.A.1.3.8 / Q52812 AapJ, component of General L-amino acid porter; transports basic and acidic amino acids preferentially, but also transports aliphatic amino acids (catalyzes both uptake and efflux) from Rhizobium leguminosarum (biovar viciae)
PFams: SBP_bac_3
Heteromeric, 341 amino acids: PaperBLAST, CDD