GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for ectP (proline transporter EctP) in L-proline catabolism

Or see other characterized proteins similar to ectP

Or see all steps for L-proline catabolism

Or cluster curated proteins matching a keyword

Definition of ectP

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 553-615 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

ECTP_CORGL / Q79VE0 Ectoine/glycine betaine/proline transporter EctP from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
TC 2.A.15.1.2 / Q79VE0 Ectosine/glycine betaine/proline:Na+ symporter
PFams: BCCT
615 amino acids: PaperBLAST, CDD, Compare to cluster

BCCT2_VIBPA / Q87NZ5 Glycine betaine/proline/choline transporter VP1723 from Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
PFams: BCCT
553 amino acids: PaperBLAST, CDD, Compare to cluster

BCCT1_VIBPA / Q87PP5 Glycine betaine/proline/choline/ectoine transporter VP1456 from Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
PFams: BCCT
562 amino acids: PaperBLAST, CDD, Compare to cluster