GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to natA

Finding the characterized proteins for natA (proline ABC transporter, ATPase component 1 (NatA)) in L-proline catabolism

Or see clustering for step natA

Or see all steps for L-proline catabolism

Or cluster curated proteins matching a keyword

Definition of natA

Fetched 2 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 4 other characterized sequences. (Found 6 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for natA.)

TC 3.A.1.4.3 / Q8VM83 BraF aka Bra2F, component of General L- (and D-)amino acid uptake porter (transports acidic, basic, polar, semipolar and hydrophobic amino acids). The amino and carboxyl groups do not need to be α since γ-aminobutyric acid (GABA) is a substrate. The system may function with additional binding proteins since L-alanine uptake is not dependent on BraC from Rhizobium leguminosarum (biovar viciae)
PFams: ABC_tran, AAA_21, BCA_ABC_TP_C
Heteromeric, 257 amino acids: PaperBLAST, CDD, TCDB::Q8VM83
42% identical to

TC 3.A.1.4.6 / Q7A2H0 NatA, component of The neutral amino acid permease, N-1 (transports pro, phe, leu, gly, ala, ser, gln and his, but gln and his are not transported via NatB)
PFams: ABC_tran, BCA_ABC_TP_C
Heteromeric, 260 amino acids: PaperBLAST, CDD

TC 3.A.1.4.10 / Q8DQH8 ABC transporter ATP-binding protein-branched chain amino acid transport, component of The branched chain hydrophobic amino acid transporter, LivJFGHM from Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
PFams: AAA_23, ABC_tran, BCA_ABC_TP_C
Heteromeric, 254 amino acids: PaperBLAST, CDD, TCDB::Q8DQH8
41% identical to

TC 3.A.1.4.6 / Q7A2H0 NatA, component of The neutral amino acid permease, N-1 (transports pro, phe, leu, gly, ala, ser, gln and his, but gln and his are not transported via NatB)
PFams: ABC_tran, BCA_ABC_TP_C
Heteromeric, 260 amino acids: PaperBLAST, CDD

TC 3.A.1.4.8 / P21629 High-affinity branched-chain amino acid transport ATP-binding protein BraF, component of Branched chain amino acid uptake transporter. Transports alanine from Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
PFams: ABC_tran, BCA_ABC_TP_C
Heteromeric, 255 amino acids: PaperBLAST, CDD, TCDB::P21629
41% identical to

TC 3.A.1.4.6 / Q7A2H0 NatA, component of The neutral amino acid permease, N-1 (transports pro, phe, leu, gly, ala, ser, gln and his, but gln and his are not transported via NatB)
PFams: ABC_tran, BCA_ABC_TP_C
Heteromeric, 260 amino acids: PaperBLAST, CDD

b3455 branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivG (EC 7.4.2.2) from Escherichia coli K-12 substr. MG1655
TC 3.A.1.4.1 / P0A9S7 High-affinity branched-chain amino acid transport ATP-binding protein LivG aka B3455, component of Leucine; leucine/isoleucine/valine porter from Escherichia coli
P0A9S7 branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivG (EC 7.4.2.2) from Escherichia coli (strain K12)
PFams: ABC_tran, BCA_ABC_TP_C
Heteromeric, 255 amino acids: PaperBLAST, CDD, TCDB::P0A9S7
41% identical to

TC 3.A.1.4.2 / Q55164 NatA aka BRAF aka SLR0467, component of Leucine/proline/alanine/serine/glycine (and possibly histidine) porter, NatABCDE
PFams: ABC_tran, BCA_ABC_TP_C
Heteromeric, 267 amino acids: PaperBLAST, CDD