GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for prdA (D-proline reductase, prdA component) in L-proline catabolism

Or see other characterized proteins similar to prdA

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Or cluster curated proteins matching a keyword

Definition of prdA

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Acetoanaerobium sticklandii

PRDA_ACESD / Q9Z4P6 D-proline reductase proprotein PrdA; EC 1.21.4.1 from Acetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIMB 10654) (Clostridium sticklandii)
Q9Z4P6 proprotein PrdA from Acetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIMB 10654)
PFams: Gly_reductase
629 amino acids: PaperBLAST, CDD (Cluster 1)

Clostridium sticklandii

SP|Q9Z4P6 D-proline reductase, PrdA proprotein; EC 1.21.4.1 from Clostridium sticklandii
PFams: Gly_reductase
630 amino acids: PaperBLAST, CDD (Cluster 1)