Clusters of Characterized Proteins

Clustering the characterized proteins for proV (proline ABC transporter, ATPase component ProV) in L-proline catabolism

Or see other characterized proteins similar to proV

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Definition of proV

• Curated sequence CH_001555: glycine betaine/l-proline transport atp-binding protein prov. Glycine betaine/proline betaine transport system ATP-binding protein ProV. ProV aka B2677, component of Glycine betaine/proline porter, ProU or ProVWX (also transports proline betaine, carnitine, dimethyl proline, homobetaine, γ-butyrobetaine and choline with low affinity). glycine betaine ABC transporter ATP binding subunit ProV (EC 7.6.2.9). glycine betaine ABC transporter ATP binding subunit ProV (EC 7.6.2.9)
• Curated sequence P17328: Glycine betaine/proline betaine transport system ATP-binding protein ProV
• Ignore hits to E0SCY1 when looking for 'other' hits (Glycine betaine/choline transport system ATP-binding protein OusV)
• Comment: E.coli/Salmonella have proVWX (only ProV is curated in S. typhimurium). Ignore a similar system in Dickeya dadantii (or Erwinia chrysanthemi) reported to act on glycine betaine only

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Escherichia coli

b2677 glycine betaine ABC transporter ATP binding subunit ProV (EC 7.6.2.9) from Escherichia coli K-12 substr. MG1655
P14175 glycine betaine ABC transporter ATP binding subunit ProV (EC 7.6.2.9) from Escherichia coli (strain K12)
PROV_ECOLI / P14175 Glycine betaine/proline betaine transport system ATP-binding protein ProV from Escherichia coli (strain K12)
TC 3.A.1.12.1 / P14175 ProV aka B2677, component of Glycine betaine/proline porter, ProU or ProVWX (also transports proline betaine, carnitine, dimethyl proline, homobetaine, γ-butyrobetaine and choline with low affinity) from Escherichia coli
GB|AAC75724.1 glycine betaine/l-proline transport atp-binding protein prov from Escherichia coli K12
PFams: ABC_tran, CBS
Heteromeric, 400 amino acids: PaperBLAST, CDD (Cluster 1)

Salmonella typhimurium

PROV_SALTY / P17328 Glycine betaine/proline betaine transport system ATP-binding protein ProV from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
PFams: ABC_tran, CBS
400 amino acids: PaperBLAST, CDD (Cluster 1)