GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to dctP

Finding the characterized proteins for dctP (pyruvate TRAP transporter, substrate-binding component) in pyruvate catabolism

Or see clustering for step dctP

Or see all steps for pyruvate catabolism

Or cluster curated proteins matching a keyword

Definition of dctP

Fetched 3 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 3 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for dctP.)

TAKP_RHOS4 / Q3J1R2 Alpha-keto acid-binding periplasmic protein TakP; Extracytoplasmic solute receptor protein TakP; TRAP transporter alpha-keto acid-binding subunit P; TRAP-T family sorbitol/mannitol transporter, periplasmic binding protein, SmoM from Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
PFams: DctP
365 amino acids: PaperBLAST, CDD, SwissProt::Q3J1R2
80% identical to

TC 2.A.56.3.4 / D5ALT6 TRAP dicarboxylate transporter, DctP-2 subunit, component of The 2-ketomonocarboxylate transporter (presented in order of affinity - 2-oxovalerate [highest affinity, KD=0.1 μM], 2-oxoisovalerate, 2-oxobutyrate, 2-oxoisocaproate, 2-oxo-3-methylvalerate, pyruvate [lowest affinity, KD=3 μM]) from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
PFams: DctP
Heteromeric, 365 amino acids: PaperBLAST, CDD