GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for LRA2 (L-rhamnono-gamma-lactonase) in L-rhamnose catabolism

Or see other characterized proteins similar to LRA2

Or see all steps for L-rhamnose catabolism

Or cluster curated proteins matching a keyword

Definition of LRA2

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 336-340 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

RMGL_PICST / A3LZU8 L-rhamnono-gamma-lactonase; EC from Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis)
PFams: Amidohydro_2
336 amino acids: PaperBLAST, CDD, Compare to cluster

Q6BQZ8 L-rhamnono-γ-lactonase (EC from Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
PFams: Amidohydro_2
340 amino acids: PaperBLAST, CDD, Compare to cluster