GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for LRA4 (2-keto-3-deoxy-L-rhamnonate aldolase) in L-rhamnose catabolism

Or see other characterized proteins similar to LRA4

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Definition of LRA4

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by cluster

Escherichia coli

b2245 2-keto-3-deoxy-L-rhamnonate aldolase (EC 4.1.2.53) from Escherichia coli K-12 substr. MG1655
P76469 2-keto-3-deoxy-L-rhamnonate aldolase (EC 4.1.2.53) from Escherichia coli (strain K12)
RHMA_ECOLI / P76469 2-keto-3-deoxy-L-rhamnonate aldolase; KDR aldolase; 2-dehydro-3-deoxyrhamnonate aldolase; 2-keto-3-deoxy acid sugar aldolase; EC 4.1.2.53 from Escherichia coli (strain K12)
P76469 2-keto-3-deoxy-L-rhamnonate aldolase (EC 4.1.2.53) from Escherichia coli
PFams: HpcH_HpaI
267 amino acids: PaperBLAST, CDD (Singleton 1)

Scheffersomyces stipitis

A3LZU9 2-keto-3-deoxy-L-rhamnoate aldolase (EC 4.1.2.53) from Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
PFams: DHDPS
310 amino acids: PaperBLAST, CDD (Singleton 2)