Other Characterized Proteins Similar to mtlF

Finding the characterized proteins for mtlF (ABC transporter for polyols MtlEFGK, permease component MtlF) in D-sorbitol (glucitol) catabolism

Or see clustering for step mtlF

Or see all steps for D-sorbitol (glucitol) catabolism

Or cluster curated proteins matching a keyword

Definition of mtlF

• Curated sequence O30492: MtlF, component of The polyol (mannitol, glucitol (sorbitol), arabitol (arabinitol; lyxitol)) uptake porter, MtlEFGK
• Curated sequence BPHYT_RS16110: ABC transporter for D-Sorbitol, permease component 2
• Curated sequence GFF1304: ABC transporter for D-Sorbitol, permease component 2
• Curated sequence GFF2492: ABC transporter for D-Mannitol, D-Mannose, and D-Sorbitol, permease component 2
• Curated sequence Ac3H11_2943: ABC transporter for D-Sorbitol, permease component 2
• Curated sequence AO356_00020: ABC transporter for D-Sorbitol, permease component 2
• Curated sequence Pf6N2E2_1962: ABC transporter for D-sorbitol, permease component 1
• Curated sequence O30832: SmoF, component of Hexitol (glucitol; mannitol) porter
• Ignore hits to AO353_25885 when looking for 'other' hits (ABC transporter for D-mannitol and D-mannose, permease component 1)
• Ignore hits to PfGW456L13_3041 when looking for 'other' hits (ABC transporter for D-Mannitol, D-Mannose, and D-Mannose, permease component 2)

Fetched 8 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 2 other characterized sequences. (Found 10 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for mtlF.)

AO353_25885 ABC transporter for D-mannitol and D-mannose, permease component 1 from Pseudomonas fluorescens FW300-N2E3
PFams: BPD_transp_1
Heteromeric, 308 amino acids: PaperBLAST, CDD, reanno::pseudo3_N2E3:AO353_25885
95% identical to

TC 3.A.1.1.49 / O30492 MtlF, component of The polyol (mannitol, glucitol (sorbitol), arabitol (arabinitol; lyxitol)) uptake porter, MtlEFGK from Pseudomonas fluorescens
PFams: BPD_transp_1
Heteromeric, 296 amino acids: PaperBLAST, CDD

PfGW456L13_3041 ABC transporter for D-Mannitol, D-Mannose, and D-Mannose, permease component 2 from Pseudomonas fluorescens GW456-L13
PFams: BPD_transp_1
Heteromeric, 299 amino acids: PaperBLAST, CDD, reanno::pseudo13_GW456_L13:PfGW456L13_3041
93% identical to

PS417_12710 ABC transporter for D-Mannitol, D-Mannose, and D-Sorbitol, permease component 2 from Pseudomonas simiae WCS417
PFams: BPD_transp_1
Heteromeric, 297 amino acids: PaperBLAST, CDD