GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to mtlG

Finding the characterized proteins for mtlG (ABC transporter for polyols MtlEFGK, permease component MtlG) in D-sorbitol (glucitol) catabolism

Or see clustering for step mtlG

Or see all steps for D-sorbitol (glucitol) catabolism

Or cluster curated proteins matching a keyword

Definition of mtlG

Fetched 7 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 4 other characterized sequences. (Found 11 hits including self hits.)

Removing ignored items reduces this to 1 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for mtlG.)

Dshi_0549 ABC transporter for Xylitol, permease component 2 from Dinoroseobacter shibae DFL-12
PFams: BPD_transp_1
Heteromeric, 272 amino acids: PaperBLAST, CDD, reanno::Dino:3607127
42% identical to

PS417_12705 ABC transporter for D-Mannitol, D-Mannose, and D-Sorbitol, permease component 1 from Pseudomonas simiae WCS417
PFams: BPD_transp_1
Heteromeric, 276 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for mtlG.)

AO353_25890 ABC transporter for D-mannitol and D-mannose, permease component 2 from Pseudomonas fluorescens FW300-N2E3
PFams: BPD_transp_1
Heteromeric, 276 amino acids: PaperBLAST, CDD, reanno::pseudo3_N2E3:AO353_25890
97% identical to

PS417_12705 ABC transporter for D-Mannitol, D-Mannose, and D-Sorbitol, permease component 1 from Pseudomonas simiae WCS417
PFams: BPD_transp_1
Heteromeric, 276 amino acids: PaperBLAST, CDD

PfGW456L13_3040 ABC transporter for D-Mannitol, D-Mannose, and D-Mannose, permease component 1 from Pseudomonas fluorescens GW456-L13
PFams: BPD_transp_1
Heteromeric, 276 amino acids: PaperBLAST, CDD, reanno::pseudo13_GW456_L13:PfGW456L13_3040
95% identical to

PS417_12705 ABC transporter for D-Mannitol, D-Mannose, and D-Sorbitol, permease component 1 from Pseudomonas simiae WCS417
PFams: BPD_transp_1
Heteromeric, 276 amino acids: PaperBLAST, CDD

TC 3.A.1.1.5 / O30833 SmoG, component of Hexitol (glucitol; mannitol) porter from Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
PFams: BPD_transp_1
Heteromeric, 276 amino acids: PaperBLAST, CDD, TCDB::O30833
73% identical to

PGA1_c13190 ABC transporter for D-Sorbitol, permease component 1 from Phaeobacter inhibens BS107
PFams: BPD_transp_1
Heteromeric, 276 amino acids: PaperBLAST, CDD