Clusters of Characterized Proteins

GapMind for catabolism of small carbon sources

Clusters of Characterized Proteins

Clustering the characterized proteins for srlE (PTS system for sorbitol SrlABE, EII-BC1 component SrlE) in D-sorbitol (glucitol) catabolism

Or see other characterized proteins similar to srlE

Or see all steps for D-sorbitol (glucitol) catabolism

Or cluster curated proteins matching a keyword

Definition of srlE

Curated sequence O32333: PTS system glucitol/sorbitol-specific EIIB component; EII-Gut; Enzyme II-Gut; Glucitol/sorbitol-specific phosphotransferase enzyme IIB component; EC 2.7.1.198. PTS system, glucitol/sorbitol-specific, IIBC component. Glucitol/sorbitol-specific phosphotransferase enzyme IIB component, component of The Glucitol Enzyme II complex, IICBC (GutA1A2) IIA (GutB)
Curated sequence O32522: PTS system glucitol/sorbitol-specific EIIB component; EII-Gut; Enzyme II-Gut; Glucitol/sorbitol-specific phosphotransferase enzyme IIB component; EC 2.7.1.198
Curated sequence P56580: PTS system glucitol/sorbitol-specific EIIB component; EII-Gut; Enzyme II-Gut; Glucitol/sorbitol-specific phosphotransferase enzyme IIB component; EC 2.7.1.198. PTHB aka SRLE aka GUTE aka B2703, component of Glucitol porter. sorbitol-specific PTS enzyme IIBC₁ component (EC 2.7.1.198; EC 2.7.1.197). sorbitol-specific PTS enzyme IIBC₁ component (EC 2.7.1.198; EC 2.7.1.197)

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 319-336 amino acids (2/3 heteromeric)

The first sequence in each cluster is the seed.

PTHB_CLOB8 / O32333 PTS system glucitol/sorbitol-specific EIIB component; EII-Gut; Enzyme II-Gut; Glucitol/sorbitol-specific phosphotransferase enzyme IIB component; EC 2.7.1.198 from Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum)
TC 4.A.4.1.2 / O32333 Glucitol/sorbitol-specific phosphotransferase enzyme IIB component, component of The Glucitol Enzyme II complex, IICBC (GutA1A2) IIA (GutB) from Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)
RF|YP_001307481.1 PTS system, glucitol/sorbitol-specific, IIBC component from Clostridium beijerinckii NCIMB 8052
PFams: EIIBC-GUT_N, EIIBC-GUT_C
Heteromeric, 336 amino acids: PaperBLAST, CDD, Compare to cluster

PTHB_ERWAM / O32522 PTS system glucitol/sorbitol-specific EIIB component; EII-Gut; Enzyme II-Gut; Glucitol/sorbitol-specific phosphotransferase enzyme IIB component; EC 2.7.1.198 from Erwinia amylovora (Fire blight bacteria)
PFams: EIIBC-GUT_N, EIIBC-GUT_C
333 amino acids: PaperBLAST, CDD, Compare to cluster

b2703 sorbitol-specific PTS enzyme IIBC₁ component (EC 2.7.1.198; EC 2.7.1.197) from Escherichia coli K-12 substr. MG1655
P56580 sorbitol-specific PTS enzyme IIBC₁ component (EC 2.7.1.198; EC 2.7.1.197) from Escherichia coli (strain K12)
PTHB_ECOLI / P56580 PTS system glucitol/sorbitol-specific EIIB component; EII-Gut; Enzyme II-Gut; Glucitol/sorbitol-specific phosphotransferase enzyme IIB component; EC 2.7.1.198 from Escherichia coli (strain K12)
TC 4.A.4.1.1 / P56580 PTHB aka SRLE aka GUTE aka B2703, component of Glucitol porter from Escherichia coli
PFams: EIIBC-GUT_N, EIIBC-GUT_C
Heteromeric, 319 amino acids: PaperBLAST, CDD, Compare to cluster