GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for fruII-B (fructose-specific PTS system (fructose 1-phosphate forming), EII-B component) in sucrose catabolism

Or see other characterized proteins similar to fruII-B

Or see all steps for sucrose catabolism

Or cluster curated proteins matching a keyword

Definition of fruII-B

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Haloarcula marismortui

TC 4.A.2.1.26 / Q5V5X1 Phosphotransferase system IIB component, component of Fructose-specific Enzyme I-HPr-Enzyme IIABC complex, all encoded within a single operon with genes in the order: ptsC (IIC), ptsA (IIA), ptsH (HPr), ptsI (Enzyme I) and ptsB (IIB) from Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
PFams: PTS_IIB
Heteromeric, 143 amino acids: PaperBLAST, CDD (Cluster 1)

Haloferax volcanii

PTFB_HALVD / D4GYE1 PTS system fructose-specific EIIB component; EIIB-Fru; Fructose-specific phosphotransferase enzyme IIB component; EC 2.7.1.202 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii)
TC 4.A.2.1.15 / D4GYE1 Phosphotransferase system IIB component, component of Fructose-specific PTS, PtfABC from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
PFams: PTS_IIB
Heteromeric, 158 amino acids: PaperBLAST, CDD (Cluster 1)

Haloterrigena turkmenica

TC 4.A.2.1.14 / D2RXA4 PTS system, fructose-specific, IIB subunnit, component of Fructose Enzyme II complex (IIAFru - IIBFru - IICFru) (based on homology) from Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734)
PFams: PTS_IIB
Heteromeric, 150 amino acids: PaperBLAST, CDD (Cluster 1)