GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for mglC (glucose ABC transporter, permease component (MglC)) in sucrose catabolism

Or see other characterized proteins similar to mglC

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Or cluster curated proteins matching a keyword

Definition of mglC

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 2 clusters of similar sequences. Download as table or as draft rules or view by cluster

Agrobacterium radiobacter

TC 3.A.1.2.5 / O05177 GguB aka ATU2346 aka AGR_C_4262, component of Multiple sugar (arabinose, xylose, galactose, glucose, fucose) putative porter from Agrobacterium radiobacter
PFams: BPD_transp_2
Heteromeric, 398 amino acids: PaperBLAST, CDD (Cluster 2)

Escherichia coli

b2148 D-galactose/methyl-galactoside ABC transporter membrane subunit from Escherichia coli K-12 substr. MG1655
TC 3.A.1.2.3 / P23200 MglC aka B2148, component of Galactose/glucose (methyl galactoside) porter from Escherichia coli
P23200 D-galactose/methyl-galactoside ABC transporter membrane subunit from Escherichia coli (strain K12)
PFams: BPD_transp_2
Heteromeric, 336 amino acids: PaperBLAST, CDD (Cluster 1)

Phaeobacter inhibens

PGA1_262p00440 glucose transporter, permease component from Phaeobacter inhibens BS107
PFams: BPD_transp_2
Heteromeric, 433 amino acids: PaperBLAST, CDD (Cluster 2)

Thermotoga maritima

TC 3.A.1.2.20 / G4FGN4 Putative beta-xyloside ABC transporter, permease component, component of Glucose porter. Also bind xylose (Boucher and Noll 2011). Induced by glucose (Frock et al. 2012). Directly regulated by glucose-responsive regulator GluR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: BPD_transp_2
Heteromeric, 313 amino acids: PaperBLAST, CDD (Cluster 1)