GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for sacP (sucrose phosphotransferase enzyme EII-BC) in sucrose catabolism

Or see other characterized proteins similar to sacP

Or see all steps for sucrose catabolism

Or cluster curated proteins matching a keyword

Definition of sacP

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 456-480 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

P27219 Enzyme IIscr (EC 2.7.1.211) from Klebsiella pneumoniae
P27219 protein-Npi-phosphohistidine-sucrose phosphotransferase (EC 2.7.1.211) from Klebsiella pneumoniae
PFams: PTS_EIIB, PTS_EIIC
456 amino acids: PaperBLAST, CDD, Compare to cluster

P51184 Enzyme IIscr (EC 2.7.1.211) from Staphylococcus xylosus
P51184 protein-Npi-phosphohistidine-sucrose phosphotransferase (EC 2.7.1.211) from Staphylococcus xylosus
PFams: PTS_EIIB, PTS_EIIC
480 amino acids: PaperBLAST, CDD, Compare to cluster

SACX_BACSU / P15400 Negative regulator of SacY activity; PTS system sac EIIBC component; EC 2.7.1.- from Bacillus subtilis (strain 168)
TC 4.A.1.2.10 / P15400 Sucrose porter and regulatory sensor, IIBC (SacX) (43% identical to 4.A.1.2.1) (Tortosa and Le Coq 1995). The IIA domains of PtsA, GamP, PtsG and GmuA can all phosphorylate the IIB domain in the SacX sensor from Bacillus subtilis
PFams: PTS_EIIB, PTS_EIIC
459 amino acids: PaperBLAST, CDD, Compare to cluster

TC 4.A.1.2.9 / P05306 Sucrose porter, IIBC (SacP) (55% identical to 4.A.1.2.1) from Bacillus subtilis
PFams: PTS_EIIB, PTS_EIIC
461 amino acids: PaperBLAST, CDD, Compare to cluster

TC 4.A.1.2.1 / P08470 Sucrose porter (ScrA) from Salmonella typhimurium
PFams: PTS_EIIB, PTS_EIIC
456 amino acids: PaperBLAST, CDD, Compare to cluster