GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to scrB

Finding the characterized proteins for scrB (sucrose-6-phosphate hydrolase) in sucrose catabolism

Or see clustering for step scrB

Or see all steps for sucrose catabolism

Or cluster curated proteins matching a keyword

Definition of scrB

Fetched 4 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 15 other characterized sequences. (Found 19 hits including self hits.)

Removing ignored items reduces this to 1 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for scrB.)

Pf6N2E2_1650 Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens FW300-N2E2
PFams: Glyco_hydro_32N, Glyco_hydro_32C
500 amino acids: PaperBLAST, CDD, reanno::pseudo6_N2E2:Pf6N2E2_1650
41% identical to

SCRB_KLEPN / P27217 Sucrose-6-phosphate hydrolase; Sucrase; Invertase; EC 3.2.1.26 from Klebsiella pneumoniae
P27217 sucrose-6-phosphate hydrolase from Klebsiella pneumoniae
CAA40659.1 invertase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
466 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for scrB.)

AAS47898.1 β-fructohydrolase (ScrB) (intracellular) (EC 3.2.1.26) (see protein)
CAA47974.1 invertase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
466 amino acids: PaperBLAST, CDD, CAZy::AAS47898.1
75% identical to

SCRB_KLEPN / P27217 Sucrose-6-phosphate hydrolase; Sucrase; Invertase; EC 3.2.1.26 from Klebsiella pneumoniae
P27217 sucrose-6-phosphate hydrolase from Klebsiella pneumoniae
CAA40659.1 invertase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
466 amino acids: PaperBLAST, CDD

AAA26972.1 invertase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32N, Glyco_hydro_32C
454 amino acids: PaperBLAST, CDD, CAZy::AAA26972.1
67% identical to

S68598 sucrose-6-phosphate hydrolase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
479 amino acids: PaperBLAST, CDD

AAK75801.1 sucrose-6-P hydrolase (ScrH;SP1724) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
484 amino acids: PaperBLAST, CDD, CAZy::AAK75801.1
63% identical to

S68598 sucrose-6-phosphate hydrolase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
479 amino acids: PaperBLAST, CDD

CAC14601.1 invertase (ScrB;EAMY_1615) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
469 amino acids: PaperBLAST, CDD, CAZy::CAC14601.1
56% identical to

SCRB_KLEPN / P27217 Sucrose-6-phosphate hydrolase; Sucrase; Invertase; EC 3.2.1.26 from Klebsiella pneumoniae
P27217 sucrose-6-phosphate hydrolase from Klebsiella pneumoniae
CAA40659.1 invertase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
466 amino acids: PaperBLAST, CDD

ADM96585.1 invertase (ScrB;Dda3937_01266) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
470 amino acids: PaperBLAST, CDD, CAZy::ADM96585.1
56% identical to

SCRB_KLEPN / P27217 Sucrose-6-phosphate hydrolase; Sucrase; Invertase; EC 3.2.1.26 from Klebsiella pneumoniae
P27217 sucrose-6-phosphate hydrolase from Klebsiella pneumoniae
CAA40659.1 invertase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
466 amino acids: PaperBLAST, CDD

AAA25218.1 invertase (ScrB;SacA) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
473 amino acids: PaperBLAST, CDD, CAZy::AAA25218.1
49% identical to

S68598 sucrose-6-phosphate hydrolase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
479 amino acids: PaperBLAST, CDD

ADN97377.1 β-fructofuranosidase (SacA;LPST_C0153) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
501 amino acids: PaperBLAST, CDD, CAZy::ADN97377.1
43% identical to

S68598 sucrose-6-phosphate hydrolase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
479 amino acids: PaperBLAST, CDD

AAF35841.1 sucrose-6-P hydrolase (ScrB;SacA;CAC0425) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
490 amino acids: PaperBLAST, CDD, CAZy::AAF35841.1
42% identical to

CAG25843.1 sucrose-6-phosphate hydrolase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
469 amino acids: PaperBLAST, CDD

AAA22723.1 invertase (SacA;BSU38040;IPA-50D) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
480 amino acids: PaperBLAST, CDD, CAZy::AAA22723.1
41% identical to

CAG25843.1 sucrose-6-phosphate hydrolase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
469 amino acids: PaperBLAST, CDD

AAA25568.1 invertase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
501 amino acids: PaperBLAST, CDD, CAZy::AAA25568.1
42% identical to

S68598 sucrose-6-phosphate hydrolase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
479 amino acids: PaperBLAST, CDD

AAB38976.1 invertase (SurA) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N
445 amino acids: PaperBLAST, CDD, CAZy::AAB38976.1
43% identical to

CAG25843.1 sucrose-6-phosphate hydrolase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
469 amino acids: PaperBLAST, CDD

CAA57219.1 invertase (CscA) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
477 amino acids: PaperBLAST, CDD, CAZy::CAA57219.1
40% identical to

SCRB_KLEPN / P27217 Sucrose-6-phosphate hydrolase; Sucrase; Invertase; EC 3.2.1.26 from Klebsiella pneumoniae
P27217 sucrose-6-phosphate hydrolase from Klebsiella pneumoniae
CAA40659.1 invertase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
466 amino acids: PaperBLAST, CDD

AAA24499.1 invertase (RafD) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
476 amino acids: PaperBLAST, CDD, CAZy::AAA24499.1
40% identical to

SCRB_KLEPN / P27217 Sucrose-6-phosphate hydrolase; Sucrase; Invertase; EC 3.2.1.26 from Klebsiella pneumoniae
P27217 sucrose-6-phosphate hydrolase from Klebsiella pneumoniae
CAA40659.1 invertase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
466 amino acids: PaperBLAST, CDD

AO356_28590 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) from Pseudomonas fluorescens FW300-N2C3
PFams: Glyco_hydro_32N, Glyco_hydro_32C
500 amino acids: PaperBLAST, CDD, reanno::pseudo5_N2C3_1:AO356_28590
41% identical to

SCRB_KLEPN / P27217 Sucrose-6-phosphate hydrolase; Sucrase; Invertase; EC 3.2.1.26 from Klebsiella pneumoniae
P27217 sucrose-6-phosphate hydrolase from Klebsiella pneumoniae
CAA40659.1 invertase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
466 amino acids: PaperBLAST, CDD