GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to dddA

Finding the characterized proteins for dddA (3-hydroxypropionate dehydrogenase) in L-threonine catabolism

Or see clustering for step dddA

Or see all steps for L-threonine catabolism

Or cluster curated proteins matching a keyword

Definition of dddA

Fetched 2 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 3 other characterized sequences. (Found 5 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for dddA.)

Q00593 octanol dehydrogenase from Pseudomonas oleovorans
PFams: GMC_oxred_N, GMC_oxred_C
558 amino acids: PaperBLAST, CDD, metacyc::MONOMER-1081
40% identical to

C8YX89 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. HTNK1
PFams: GMC_oxred_N, GMC_oxred_C
579 amino acids: PaperBLAST, CDD

b0311 choline dehydrogenase (EC 1.1.99.1) from Escherichia coli K-12 substr. MG1655
BETA_ECOLI / P17444 Oxygen-dependent choline dehydrogenase; CDH; CHD; Betaine aldehyde dehydrogenase; BADH; EC 1.1.99.1; EC 1.2.1.8 from Escherichia coli (strain K12)
P17444 choline dehydrogenase (EC 1.1.99.1) from Escherichia coli (strain K12)
GB|AP_000964.1 choline dehydrogenase; EC 1.1.99.1 from Escherichia coli K12
PFams: GMC_oxred_N, GMC_oxred_C
556 amino acids: PaperBLAST, CDD, CharProtDB::CH_002259
40% identical to

C8YX89 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. HTNK1
PFams: GMC_oxred_N, GMC_oxred_C
579 amino acids: PaperBLAST, CDD

Q76HN6 alcohol dehydrogenase (EC 1.1.1.1) from Pseudomonas putida
PFams: GMC_oxred_N, Lycopene_cycl, GMC_oxred_C
526 amino acids: PaperBLAST, CDD, BRENDA::Q76HN6
40% identical to

C8YX89 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. HTNK1
PFams: GMC_oxred_N, GMC_oxred_C
579 amino acids: PaperBLAST, CDD