GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for dddA (3-hydroxypropionate dehydrogenase) in L-threonine catabolism

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Definition of dddA

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by cluster

Candida albicans

A0A1D8PQ07 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Candida albicans
A0A1D8PQ07 3-hydroxypropanonate dehydrogenase (EC 1.1.1.59) from Candida albicans (strain SC5314 / ATCC MYA-2876)
PFams: NAD_binding_2, NAD_binding_11
354 amino acids: PaperBLAST, CDD (Singleton 2)

Halomonas HTNK1

C8YX89 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. HTNK1
PFams: GMC_oxred_N, GMC_oxred_C
579 amino acids: PaperBLAST, CDD (Singleton 1)