Other Characterized Proteins Similar to epi

Finding the characterized proteins for epi (methylmalonyl-CoA epimerase) in L-threonine catabolism

Or see clustering for step epi

Or see all steps for L-threonine catabolism

Or cluster curated proteins matching a keyword

Definition of epi

• Curated proteins or TIGRFams with EC 5.1.99.1
• Ignore hits to 3607309 when looking for 'other' hits (Methylmalonyl-CoA epimerase (EC 5.1.99.1))
• Comment: In the fitness browser reannotations, Dshi_0724 from Dinoroseobacter shibae (Dino:3607309) was annotated as the epimerase because it was annotated as such by SEED and it has a specific phenotype on propionate, which seemed to confirm its annotation. But Dshi_0724 belongs to the uncharacterized family DUF4174 / PF13778 and has a signal peptide. Also, D. shibae contains another, apparently essential, epi (Dshi_2630).

Fetched 9 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 0 other characterized sequences. (Found 9 hits including self hits.)