GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to ltaE

Finding the characterized proteins for ltaE (L-threonine aldolase) in L-threonine catabolism

Or see clustering for step ltaE

Or see all steps for L-threonine catabolism

Or cluster curated proteins matching a keyword

Definition of ltaE

Fetched 13 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 4 other characterized sequences. (Found 17 hits including self hits.)

Removing ignored items reduces this to 3 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for ltaE.)

CH_122707 hydroxytrimethyllysine aldolase from Candida albicans
PFams: Beta_elim_lyase, Aminotran_1_2
369 amino acids: PaperBLAST, CDD, CharProtDB::CH_122707
59% identical to

O13427 low-specificity L-threonine aldolase (EC 4.1.2.48) from Candida albicans
PFams: Beta_elim_lyase, Aminotran_1_2
374 amino acids: PaperBLAST, CDD

Q59IT3 phenylserine aldolase (EC 4.1.2.26) from Pseudomonas putida
GI|62084361 phenylserine aldolase; EC 4.1.2.26 from Pseudomonas putida
PFams: Beta_elim_lyase
357 amino acids: PaperBLAST, CDD, CharProtDB::CH_090823
51% identical to

A0T1V9 low-specificity L-threonine aldolase (EC 4.1.2.48) from Sinorhizobium arboris
PFams: Beta_elim_lyase
348 amino acids: PaperBLAST, CDD

VRTJ_PENAE / D7PHZ0 Aldolase vrtJ; Viridicatumtoxin synthesis protein J; EC 4.1.2.- from Penicillium aethiopicum
PFams: Beta_elim_lyase
388 amino acids: PaperBLAST, CDD, SwissProt::D7PHZ0
45% identical to

O13427 low-specificity L-threonine aldolase (EC 4.1.2.48) from Candida albicans
PFams: Beta_elim_lyase, Aminotran_1_2
374 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for ltaE.)

CH_123166 L-threonine aldolase from Candida albicans
PFams: Beta_elim_lyase, Aminotran_1_2
373 amino acids: PaperBLAST, CDD, CharProtDB::CH_123166
98% identical to

O13427 low-specificity L-threonine aldolase (EC 4.1.2.48) from Candida albicans
PFams: Beta_elim_lyase, Aminotran_1_2
374 amino acids: PaperBLAST, CDD