GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for lutA (L-lactate dehydrogenase, LutA subunit) in L-threonine catabolism

Or see other characterized proteins similar to lutA

Or see all steps for L-threonine catabolism

Or cluster curated proteins matching a keyword

Definition of lutA

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 238-279 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

LUTA_BACSU / O07020 Lactate utilization protein A from Bacillus subtilis (strain 168)
PFams: CCG, CCG
238 amino acids: PaperBLAST, CDD, Compare to cluster

LUTA_BACCR / Q81GA5 Lactate utilization protein A from Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
PFams: CCG, CCG
239 amino acids: PaperBLAST, CDD, Compare to cluster

A0A0C4YIN5 Putative L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE
262 amino acids: PaperBLAST, CDD, Compare to cluster

E4PLR5 Uncharacterized protein
279 amino acids: PaperBLAST, CDD, Compare to cluster