GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for pco (propanyl-CoA oxidase) in L-threonine catabolism

Or see other characterized proteins similar to pco

Or see all steps for L-threonine catabolism

Or cluster curated proteins matching a keyword

Definition of pco

Fetched 27 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 24 of these sequences

Found 1 clusters of similar sequences. Another 3 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 660-719 amino acids (3/24 heteromeric)

The first sequence in each cluster is the seed.

J7K6M3 acyl-CoA oxidase (EC 1.3.3.6) from Prunus persica
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, ACOX
664 amino acids: PaperBLAST, CDD, Compare to cluster

O62137 acyl-CoA oxidase (EC 1.3.3.6) from Caenorhabditis elegans
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, ACOX
661 amino acids: PaperBLAST, CDD, Compare to cluster

O62138 acyl-CoA oxidase (EC 1.3.3.6) from Caenorhabditis elegans
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, ACOX
660 amino acids: PaperBLAST, CDD, Compare to cluster

O62140 acyl-CoA oxidase (EC 1.3.3.6) from Caenorhabditis elegans
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, ACOX
674 amino acids: PaperBLAST, CDD, Compare to cluster

ACOX2_ARATH / O65201 Acyl-coenzyme A oxidase 2, peroxisomal; AOX 2; Long-chain acyl-CoA oxidase; AtCX2; EC 1.3.3.6 from Arabidopsis thaliana (Mouse-ear cress)
O65201 acyl-CoA oxidase (EC 1.3.3.6) from Arabidopsis thaliana
O65201 acyl-CoA oxidase (EC 1.3.3.6) from Arabidopsis thaliana
PFams: Acyl-CoA_dh_M, Acyl-CoA_dh_1, ACOX
692 amino acids: PaperBLAST, CDD, Compare to cluster

ACOX1_ARATH / O65202 Peroxisomal acyl-coenzyme A oxidase 1; AOX 1; Long-chain acyl-CoA oxidase; AtCX1; EC 1.3.3.6 from Arabidopsis thaliana (Mouse-ear cress)
O65202 acyl-CoA oxidase (EC 1.3.3.6) from Arabidopsis thaliana
O65202 acyl-CoA oxidase (EC 1.3.3.6) from Arabidopsis thaliana
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, ACOX
664 amino acids: PaperBLAST, CDD, Compare to cluster

ACOX1_RAT / P07872 Peroxisomal acyl-coenzyme A oxidase 1; AOX; Palmitoyl-CoA oxidase; EC 1.3.3.6 from Rattus norvegicus (Rat)
P07872 acyl-CoA oxidase (EC 1.3.3.6) from Rattus norvegicus
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, ACOX
661 amino acids: PaperBLAST, CDD, Compare to cluster

ACOX3_ARATH / P0CZ23 Acyl-coenzyme A oxidase 3, peroxisomal; AOX 3; Acyl-CoA oxidase 3; Medium-chain acyl-CoA oxidase; AtCX3; EC 1.3.3.6 from Arabidopsis thaliana (Mouse-ear cress)
P0CZ23 acyl-CoA oxidase (EC 1.3.3.6) from Arabidopsis thaliana
P0CZ23 medium-chain acyl-CoA oxidase (EC 1.3.3.6) from Arabidopsis thaliana
PFams: Acyl-CoA_dh_M, Acyl-CoA_dh_1, ACOX
675 amino acids: PaperBLAST, CDD, Compare to cluster

ACOX1_HUMAN / Q15067 Peroxisomal acyl-coenzyme A oxidase 1; AOX; Palmitoyl-CoA oxidase; Straight-chain acyl-CoA oxidase; SCOX; EC 1.3.3.6 from Homo sapiens (Human)
Q15067 acyl-CoA oxidase (EC 1.3.3.6) from Homo sapiens
Q15067 peroxisomal acyl-coenzyme A oxidase 1 (EC 1.3.3.6) from Homo sapiens
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, ACOX
660 amino acids: PaperBLAST, CDD, Compare to cluster

Q33DR0 acyl-CoA oxidase (EC 1.3.3.6) from Paenarthrobacter ureafaciens
PFams: Acyl-CoA_dh_N, Acyl-CoA_dh_M, Acyl-CoA_dh_1, ACOX
703 amino acids: PaperBLAST, CDD, Compare to cluster

Q33DR1 acyl-CoA oxidase (EC 1.3.3.6) from Arthrobacter sp.
PFams: Acyl-CoA_dh_N, Acyl-CoA_dh_M, Acyl-CoA_dh_1, ACOX
700 amino acids: PaperBLAST, CDD, Compare to cluster

Q4QRE2 acyl-CoA oxidase (EC 1.3.3.6) from Danio rerio
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, ACOX
660 amino acids: PaperBLAST, CDD, Compare to cluster

Q69XR7 acyl-CoA oxidase (EC 1.3.3.6) from Oryza sativa
PFams: Acyl-CoA_dh_M, Acyl-CoA_dh_1, ACOX
685 amino acids: PaperBLAST, CDD, Compare to cluster

ACO12_ARATH / Q9ZQP2 Putative peroxisomal acyl-coenzyme A oxidase 1.2; EC 1.3.3.6 from Arabidopsis thaliana (Mouse-ear cress)
Q9ZQP2 acyl-CoA oxidase (EC 1.3.3.6) from Arabidopsis thaliana
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, ACOX
664 amino acids: PaperBLAST, CDD, Compare to cluster

ACOX2_CUCMA / O64894 Acyl-coenzyme A oxidase, peroxisomal; AOX; Long-chain acyl-CoA oxidase; EC 1.3.3.6 from Cucurbita maxima (Pumpkin) (Winter squash)
PFams: Acyl-CoA_dh_M, Acyl-CoA_dh_1, ACOX
690 amino acids: PaperBLAST, CDD, Compare to cluster

ACOX1_YARLI / O74934 Acyl-coenzyme A oxidase 1; Acyl-CoA oxidase 1; EC 1.3.3.6 from Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, Acyl-CoA_dh_1, ACOX
Heteromeric, 689 amino acids: PaperBLAST, CDD, Compare to cluster

ACOX2_YARLI / O74935 Acyl-coenzyme A oxidase 2; Acyl-CoA oxidase 2; EC 1.3.3.6 from Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, Acyl-CoA_dh_1, ACOX
Heteromeric, 700 amino acids: PaperBLAST, CDD, Compare to cluster

ACOX3_YARLI / O74936 Acyl-coenzyme A oxidase 3; Acyl-CoA oxidase 3; EC 1.3.3.6 from Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, Acyl-CoA_dh_1, ACOX
Heteromeric, 700 amino acids: PaperBLAST, CDD, Compare to cluster

ACOX3_RAT / Q63448 Peroxisomal acyl-coenzyme A oxidase 3; Branched-chain acyl-CoA oxidase; BRCACox; Pristanoyl-CoA oxidase; EC 1.3.3.6 from Rattus norvegicus (Rat)
PFams: Acyl-CoA_dh_M, Acyl-CoA_dh_1, ACOX
700 amino acids: PaperBLAST, CDD, Compare to cluster

ACOX1_PHACI / Q8HYL8 Peroxisomal acyl-coenzyme A oxidase 1; AOX; Palmitoyl-CoA oxidase; EC 1.3.3.6 from Phascolarctos cinereus (Koala)
Q8HYL8 acyl-CoA oxidase (EC 1.3.3.6) from Phascolarctos cinereus
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, ACOX
661 amino acids: PaperBLAST, CDD, Compare to cluster

ACOX2_HUMAN / Q99424 Peroxisomal acyl-coenzyme A oxidase 2; 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoyl-CoA 24-hydroxylase; 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoyl-CoA oxidase; Trihydroxycoprostanoyl-CoA oxidase; THCA-CoA oxidase; THCCox; EC 1.17.99.3 from Homo sapiens (Human)
Q99424 peroxisomal acyl-coenzyme A oxidase 2 (EC 1.3.3.6; EC 1.17.99.3) from Homo sapiens
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, ACOX
681 amino acids: PaperBLAST, CDD, Compare to cluster

ACOX1_MOUSE / Q9R0H0 Peroxisomal acyl-coenzyme A oxidase 1; AOX; Palmitoyl-CoA oxidase; EC 1.3.3.6 from Mus musculus (Mouse)
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, ACOX
661 amino acids: PaperBLAST, CDD, Compare to cluster

ACOX_PICPA / Q9Y7B1 Acyl-coenzyme A oxidase; Acyl-CoA oxidase; EC 1.3.3.6 from Komagataella pastoris (Yeast) (Pichia pastoris)
PFams: Acyl-CoA_ox_N, Acyl-CoA_dh_M, Acyl-CoA_dh_1, ACOX
719 amino acids: PaperBLAST, CDD, Compare to cluster

C5CBS9 acyl coA dehydrogenase (EC 1.3.3.6) from Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230)
PFams: Acyl-CoA_dh_M, Acyl-CoA_dh_1, ACOX
707 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/3 heteromeric)

Q5VRH3 acyl-CoA oxidase (EC 1.3.3.6) from Oryza sativa
68 amino acids: PaperBLAST, CDD

ACOX4_ARATH / Q96329 Acyl-coenzyme A oxidase 4, peroxisomal; AOX 4; G6p; Short-chain acyl-CoA oxidase; AtCX4; AtG6; SAOX; EC 1.3.3.6 from Arabidopsis thaliana (Mouse-ear cress)
Q96329 acyl-CoA oxidase (EC 1.3.3.6) from Arabidopsis thaliana
Q96329 4-hydroxybutanoyl-CoA oxidase (EC 1.3.3.6) from Arabidopsis thaliana
PFams: Acyl-CoA_dh_N, Acyl-CoA_dh_M, Acyl-CoA_dh_1
436 amino acids: PaperBLAST, CDD

O25465 decanoate oxidase (EC 1.3.3.6; EC 5.3.3.14) from Helicobacter pylori (strain ATCC 700392 / 26695)
PFams: NMO
363 amino acids: PaperBLAST, CDD