GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for tynA (aminoacetone oxidase) in L-threonine catabolism

Or see other characterized proteins similar to tynA

Or see all steps for L-threonine catabolism

Or cluster curated proteins matching a keyword

Definition of tynA

Fetched 19 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 19 of these sequences

Found 3 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by cluster

Arabidopsis thaliana

F4IAX0 primary-amine oxidase (EC 1.4.3.21) from Arabidopsis thaliana
PFams: Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
677 amino acids: PaperBLAST, CDD (Cluster 1)

F4IAX1 primary-amine oxidase (EC 1.4.3.21) from Arabidopsis thaliana
PFams: Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
681 amino acids: PaperBLAST, CDD (Cluster 1)

Q8H1H9 primary-amine oxidase (EC 1.4.3.21) from Arabidopsis thaliana
PFams: Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
712 amino acids: PaperBLAST, CDD (Cluster 1)

Q8L866 primary-amine oxidase (EC 1.4.3.21) from Arabidopsis thaliana
PFams: Cu_amine_oxidN3, Cu_amine_oxid
776 amino acids: PaperBLAST, CDD (Cluster 2)

O23349 copper-containing amine oxidase (EC 1.4.3.21; EC 1.4.3.10) from Arabidopsis thaliana
AO1_ARATH / O23349 Primary amine oxidase 1; AtAO1; EC 1.4.3.21 from Arabidopsis thaliana (Mouse-ear cress)
PFams: Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
650 amino acids: PaperBLAST, CDD (Cluster 1)

Arthrobacter globiformis

PAOX_ARTGO / P46881 Phenylethylamine oxidase; Primary amine oxidase; EC 1.4.3.21 from Arthrobacter globiformis
P46881 primary-amine oxidase (EC 1.4.3.21) from Arthrobacter globiformis
PFams: Cu_amine_oxidN3, Cu_amine_oxid
638 amino acids: PaperBLAST, CDD (Cluster 2)

Bos taurus

AOCX_BOVIN / Q29437 Primary amine oxidase, liver isozyme; Amine oxidase [copper-containing]; Copper amine oxidase; Serum amine oxidase; SAO; EC 1.4.3.21 from Bos taurus (Bovine)
PFams: Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
762 amino acids: PaperBLAST, CDD (Cluster 3)

Escherichia coli

b1386 copper-containing amine oxidase (EC 1.4.3.21) from Escherichia coli K-12 substr. MG1655
P46883 copper-containing amine oxidase (EC 1.4.3.21) from Escherichia coli (strain K12)
AMO_ECOLI / P46883 Primary amine oxidase; 2-phenylethylamine oxidase; Copper amine oxidase; Tyramine oxidase; EC 1.4.3.21 from Escherichia coli (strain K12)
P46883 primary-amine oxidase (EC 1.4.3.21) from Escherichia coli
PFams: Cu_amine_oxidN1, Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
757 amino acids: PaperBLAST, CDD (Cluster 1)

Euphorbia characias

Q9SW90 primary-amine oxidase (EC 1.4.3.21) from Euphorbia characias
PFams: Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
677 amino acids: PaperBLAST, CDD (Cluster 1)

Homo sapiens

AOC2_HUMAN / O75106 Retina-specific copper amine oxidase; RAO; Amine oxidase [copper-containing]; Semicarbazide-sensitive amine oxidase; SSAO; EC 1.4.3.21 from Homo sapiens (Human)
O75106 primary-amine oxidase (EC 1.4.3.21) from Homo sapiens
PFams: Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
756 amino acids: PaperBLAST, CDD (Cluster 3)

AOC3_HUMAN / Q16853 Membrane primary amine oxidase; Copper amine oxidase; HPAO; Semicarbazide-sensitive amine oxidase; SSAO; Vascular adhesion protein 1; VAP-1; EC 1.4.3.21 from Homo sapiens (Human)
Q16853 primary-amine oxidase (EC 1.4.3.21) from Homo sapiens
PFams: Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
763 amino acids: PaperBLAST, CDD (Cluster 3)

Klebsiella oxytoca

AMO_KLEOK / P80695 Primary amine oxidase; Monamine oxidase; Tyramine oxidase; EC 1.4.3.21 from Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686)
PFams: Cu_amine_oxidN1, Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
752 amino acids: PaperBLAST, CDD (Cluster 1)

Ogataea angusta

AMO_PICAN / P12807 Peroxisomal primary amine oxidase; Copper amine oxidase; Methylamine oxidase; EC 1.4.3.21 from Pichia angusta (Yeast) (Hansenula polymorpha)
P12807 primary-amine oxidase (EC 1.4.3.21) from Ogataea angusta
PFams: Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
692 amino acids: PaperBLAST, CDD (Cluster 2)

Paenarthrobacter aurescens

A1R2C3 primary-amine oxidase (EC 1.4.3.21) from Paenarthrobacter aurescens
PFams: Cu_amine_oxidN3, Cu_amine_oxid
656 amino acids: PaperBLAST, CDD (Cluster 2)

A1RDD3 primary-amine oxidase (EC 1.4.3.21) from Paenarthrobacter aurescens
PFams: Cu_amine_oxidN3, Cu_amine_oxid
654 amino acids: PaperBLAST, CDD (Cluster 1)

Pichia angusta

AMO_PICAN / P12807 Peroxisomal primary amine oxidase; Copper amine oxidase; Methylamine oxidase; EC 1.4.3.21 from Pichia angusta (Yeast) (Hansenula polymorpha)
P12807 primary-amine oxidase (EC 1.4.3.21) from Ogataea angusta
PFams: Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
692 amino acids: PaperBLAST, CDD (Cluster 2)

Pisum sativum

AMO_PEA / Q43077 Primary amine oxidase; Amine oxidase [copper-containing]; EC 1.4.3.21 from Pisum sativum (Garden pea)
Q43077 primary-amine oxidase (EC 1.4.3.21) from Pisum sativum
PFams: Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
674 amino acids: PaperBLAST, CDD (Cluster 1)

Rattus norvegicus

AOC3_RAT / O08590 Membrane primary amine oxidase; Copper amine oxidase; Semicarbazide-sensitive amine oxidase; SSAO; VP97; Vascular adhesion protein 1; VAP-1; EC 1.4.3.21 from Rattus norvegicus (Rat)
O08590 primary-amine oxidase (EC 1.4.3.21) from Rattus norvegicus
PFams: Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
763 amino acids: PaperBLAST, CDD (Cluster 3)

Schizosaccharomyces pombe

CAO1_SCHPO / Q9P7F2 Copper amine oxidase 1; EC 1.4.3.21 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
RF|NP_593985.1 copper amine oxidase Cao1; EC 1.4.3.- from Schizosaccharomyces pombe
PFams: Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
712 amino acids: PaperBLAST, CDD (Cluster 2)

CAO2_SCHPO / O42890 Copper amine oxidase-like protein cao2; EC 1.4.3.21 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
PFams: Cu_amine_oxidN2, Cu_amine_oxidN3, Cu_amine_oxid
794 amino acids: PaperBLAST, CDD (Singleton 1)