GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for aglE (trehalose ABC transporter, substrate-binding component AglE) in trehalose catabolism

Or see other characterized proteins similar to aglE

Or see all steps for trehalose catabolism

Or cluster curated proteins matching a keyword

Definition of aglE

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 452-458 amino acids (1/2 heteromeric)

The first sequence in each cluster is the seed.

SMc03061 ABC transporter for D-Maltose and D-Trehalose, ATPase component from Sinorhizobium meliloti 1021
TC 3.A.1.1.8 / Q9Z3R5 AglE aka R00695 aka SMC03061, component of Sucrose/maltose/trehalose porter (sucrose-inducible) from Rhizobium meliloti (Sinorhizobium meliloti)
PFams: SBP_bac_1
Heteromeric, 458 amino acids: PaperBLAST, CDD, Compare to cluster

A8LLL6 Putative bacterial solute-binding protein 1 family
452 amino acids: PaperBLAST, CDD, Compare to cluster