GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for aglF (trehalose ABC transporter, permease component 1 (AglF)) in trehalose catabolism

Or see other characterized proteins similar to aglF

Or see all steps for trehalose catabolism

Or cluster curated proteins matching a keyword

Definition of aglF

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Organism unknown

A8LLL5 Inner membrane ABC transporter permease protein
334 amino acids: PaperBLAST, CDD (Cluster 1)

Rhizobium meliloti

TC 3.A.1.1.8 / Q9Z3R6 AglF aka R00696 aka SMC03062, component of Sucrose/maltose/trehalose porter (sucrose-inducible) from Rhizobium meliloti (Sinorhizobium meliloti)
SMc03062 ABC transporter for D-Maltose and D-Trehalose, permease component 1 from Sinorhizobium meliloti 1021
PFams: BPD_transp_1
Heteromeric, 336 amino acids: PaperBLAST, CDD (Cluster 1)

Sinorhizobium meliloti

TC 3.A.1.1.8 / Q9Z3R6 AglF aka R00696 aka SMC03062, component of Sucrose/maltose/trehalose porter (sucrose-inducible) from Rhizobium meliloti (Sinorhizobium meliloti)
SMc03062 ABC transporter for D-Maltose and D-Trehalose, permease component 1 from Sinorhizobium meliloti 1021
PFams: BPD_transp_1
Heteromeric, 336 amino acids: PaperBLAST, CDD (Cluster 1)