GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for aglG (trehalose ABC transporter, permease component 2 (AglG)) in trehalose catabolism

Or see other characterized proteins similar to aglG

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Definition of aglG

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 380-385 amino acids (1/2 heteromeric)

The first sequence in each cluster is the seed.

A8LLL4 Inner membrane ABC transporter permease protein
385 amino acids: PaperBLAST, CDD, Compare to cluster

SMc03063 ABC transporter for D-Maltose and D-Trehalose, permease component 2 from Sinorhizobium meliloti 1021
Q9Z3R7 glucosyl-dolichyl phosphate glucuronosyltransferase (EC from Sinorhizobium meliloti
TC 3.A.1.1.8 / Q9Z3R7 AglG aka R00697 aka SMC03063, component of Sucrose/maltose/trehalose porter (sucrose-inducible) from Rhizobium meliloti (Sinorhizobium meliloti)
PFams: BPD_transp_1
Heteromeric, 380 amino acids: PaperBLAST, CDD, Compare to cluster