GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for gadh1 (gluconate 2-dehydrogenase flavoprotein subunit) in trehalose catabolism

Or see other characterized proteins similar to gadh1

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Or cluster curated proteins matching a keyword

Definition of gadh1

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Gluconobacter frateurii

A4PIB0 gluconate 2-dehydrogenase (EC from Gluconobacter frateurii
PFams: GMC_oxred_N, GMC_oxred_C
593 amino acids: PaperBLAST, CDD (Cluster 1)

Organism unknown

G5EBD9 Gluconate 2-dehydrogenase alpha chain; EC=
592 amino acids: PaperBLAST, CDD (Cluster 1)

Pantoea cypripedii

O34214 gluconate 2-dehydrogenase dehydrogenase subunit (EC from Pantoea cypripedii
GADH1_PANCY / O34214 Gluconate 2-dehydrogenase flavoprotein; GA 2-DH dehydrogenase subunit; GADH dehydrogenase subunit; EC from Pantoea cypripedii (Pectobacterium cypripedii) (Erwinia cypripedii)
PFams: GMC_oxred_N, GMC_oxred_C
Heteromeric, 615 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas fluorescens

C0LE03 gluconate 2-dehydrogenase (EC from Pseudomonas fluorescens
PFams: GMC_oxred_N, GMC_oxred_C
594 amino acids: PaperBLAST, CDD (Cluster 1)

Q4KKM7 D-gluconate dehydrogenase dehydrogenase subunit (EC from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
PFams: GMC_oxred_N, GMC_oxred_C
Heteromeric, 594 amino acids: PaperBLAST, CDD (Cluster 1)