Clusters of Characterized Proteins

Clustering the characterized proteins for lacA (periplasmic trehalose 3-dehydrogenase, LacA subunit) in trehalose catabolism

Or see other characterized proteins similar to lacA

Or see all steps for trehalose catabolism

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Definition of lacA

• Curated sequence CA265_RS15345: periplasmic glucoside 3-dehydrogenase (lacA subunit) (EC 1.1.99.13)
• Curated sequence Echvi_1847: periplasmic glucoside 3-dehydrogenase (lacA subunit) (EC 1.1.99.13)
• Ignore hits to items matching 1.1.99.13 when looking for 'other' hits
• Comment: These gene names are from the homologous system in Caulobacter crescentus, which is required for lactose utilization; but Caulobacter crescentus does not grow with trehalose as the sole source of carbon, and Caulobacter LacACB may not be active on trehalsoe.

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 559-567 amino acids (heteromeric)

Echvi_1847 periplasmic glucoside 3-dehydrogenase (lacA subunit) (EC 1.1.99.13) from Echinicola vietnamensis KMM 6221, DSM 17526
PFams: FAD_binding_2, GMC_oxred_N, GMC_oxred_C
Heteromeric, 559 amino acids: PaperBLAST, CDD, Compare to cluster

CA265_RS15345 periplasmic glucoside 3-dehydrogenase (lacA subunit) (EC 1.1.99.13) from Pedobacter sp. GW460-11-11-14-LB5
PFams: GMC_oxred_N, GMC_oxred_C
Heteromeric, 567 amino acids: PaperBLAST, CDD, Compare to cluster