GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for lacA (periplasmic trehalose 3-dehydrogenase, LacA subunit) in trehalose catabolism

Or see other characterized proteins similar to lacA

Or see all steps for trehalose catabolism

Or cluster curated proteins matching a keyword

Definition of lacA

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Echinicola vietnamensis

Echvi_1847 periplasmic glucoside 3-dehydrogenase (lacA subunit) (EC 1.1.99.13) from Echinicola vietnamensis KMM 6221, DSM 17526
PFams: FAD_binding_2, GMC_oxred_N, GMC_oxred_C
Heteromeric, 559 amino acids: PaperBLAST, CDD (Cluster 1)

Pedobacter GW460-11-11-14-LB5

CA265_RS15345 periplasmic glucoside 3-dehydrogenase (lacA subunit) (EC 1.1.99.13) from Pedobacter sp. GW460-11-11-14-LB5
PFams: GMC_oxred_N, GMC_oxred_C
Heteromeric, 567 amino acids: PaperBLAST, CDD (Cluster 1)