GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for mglA (glucose ABC transporter, ATP-binding component (MglA)) in trehalose catabolism

Or see other characterized proteins similar to mglA

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Definition of mglA

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by cluster

Agrobacterium radiobacter

TC 3.A.1.2.5 / O05176 GguA aka ATU2347 aka AGR_C_4264, component of Multiple sugar (arabinose, xylose, galactose, glucose, fucose) putative porter from Agrobacterium radiobacter
PFams: ABC_tran, ABC_tran
Heteromeric, 512 amino acids: PaperBLAST, CDD (Cluster 1)

Escherichia coli

b2149 D-galactose/methyl-galactoside ABC transporter ATP binding subunit from Escherichia coli K-12 substr. MG1655
TC 3.A.1.2.3 / P0AAG8 Galactose/methyl galactoside import ATP-binding protein MglA aka B2149, component of Galactose/glucose (methyl galactoside) porter from Escherichia coli
P0AAG8 D-galactose/methyl-galactoside ABC transporter ATP binding subunit from Escherichia coli (strain K12)
PFams: ABC_tran, ABC_tran
Heteromeric, 506 amino acids: PaperBLAST, CDD (Cluster 1)

Phaeobacter inhibens

PGA1_262p00450 glucose transporter, ATPase component from Phaeobacter inhibens BS107
PFams: ABC_tran
Heteromeric, 260 amino acids: PaperBLAST, CDD (Singleton 1)

Thermotoga maritima

TC 3.A.1.2.20 / G4FGN3 Monosaccharide-transporting ATPase, component of Glucose porter. Also bind xylose (Boucher and Noll 2011). Induced by glucose (Frock et al. 2012). Directly regulated by glucose-responsive regulator GluR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: ABC_tran, ABC_tran
Heteromeric, 494 amino acids: PaperBLAST, CDD (Cluster 1)