GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for treP (trehalose phosphorylase, inverting) in trehalose catabolism

Or see other characterized proteins similar to treP

Or see all steps for trehalose catabolism

Or cluster curated proteins matching a keyword

Definition of treP

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 757-774 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

D6XSD4 alpha,alpha-trehalose phosphorylase (EC 2.4.1.64) from Bacillus selenitireducens
PFams: Glyco_hydro_65N, Glyco_hydro_65m, Glyco_hydro_65C
757 amino acids: PaperBLAST, CDD, Compare to cluster

TREP_GEOSE / Q8GRC3 Alpha,alpha-trehalose phosphorylase; TPase; EC 2.4.1.64 from Geobacillus stearothermophilus (Bacillus stearothermophilus)
BAC20640.1 trehalose phosphorylase (TPase) (EC 2.4.1.64) (see protein)
PFams: Glyco_hydro_65N, Glyco_hydro_65m, Glyco_hydro_65C
765 amino acids: PaperBLAST, CDD, Compare to cluster

TREP_THEBR / Q8L164 Alpha,alpha-trehalose phosphorylase; TPase; EC 2.4.1.64 from Thermoanaerobacter brockii (Thermoanaerobium brockii)
Q8L164 alpha,alpha-trehalose phosphorylase (EC 2.4.1.64) from Thermoanaerobacter brockii
BAB97299.1 trehalose phosphorylase (TreP) (EC 2.4.1.64) (see protein)
PFams: Glyco_hydro_65N, Glyco_hydro_65m, Glyco_hydro_65C
774 amino acids: PaperBLAST, CDD, Compare to cluster