GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for TAT (tryptophan permease) in L-tryptophan catabolism

Or see other characterized proteins similar to TAT

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Or cluster curated proteins matching a keyword

Definition of TAT

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 592-619 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

TAT2_YEAST / P38967 Tryptophan permease; Tryptophan amino acid transporter from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
TC 2.A.3.10.8 / P38967 Tryptophan permease, Tat2. Regulated via endocytosis by ATP-binding Cassette Transporters, Pdr5 (3.A.1.205.1) and Yor1 (3.A.208.3) as well as a seven-transmembrane protein, RSB1 (9.A.27.1.2) from Saccharomyces cerevisiae (Baker's yeast)
RF|NP_014622.1 tryptophan permease from Saccharomyces cerevisiae
PFams: AA_permease_2, AA_permease
592 amino acids: PaperBLAST, CDD, Compare to cluster

TAT1_YEAST / P38085 Valine/tyrosine/tryptophan amino-acid permease 1; Tyrosine and tryptophan amino acid transporter 1 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
TC 2.A.3.10.9 / P38085 Val/Tyr/Trp permease from Saccharomyces cerevisiae (Baker's yeast)
RF|NP_009625.1 valine/tyrosine/tryptophan amino-acid permease from Saccharomyces cerevisiae
PFams: AA_permease, AA_permease_2
619 amino acids: PaperBLAST, CDD, Compare to cluster