GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to catB

Finding the characterized proteins for catB (muconate cycloisomerase) in L-tryptophan catabolism

Or see clustering for step catB

Or see all steps for L-tryptophan catabolism

Or cluster curated proteins matching a keyword

Definition of catB

Fetched 6 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 6 other characterized sequences. (Found 12 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for catB.)

P27099 chloromuconate cycloisomerase subunit (EC 5.5.1.11; EC 5.5.1.7) from Pseudomonas sp. (strain P51)
TCBD_PSESQ / P27099 Chloromuconate cycloisomerase; Muconate cycloisomerase II; EC 5.5.1.7 from Pseudomonas sp. (strain P51)
PFams: MR_MLE_N, MR_MLE_C, MAAL_C
370 amino acids: PaperBLAST, CDD, SwissProt::P27099
44% identical to

P08310 muconate lactonizing enzyme subunit (EC 5.5.1.1) from Pseudomonas putida
CATB_PSEPU / P08310 Muconate cycloisomerase 1; Cis,cis-muconate lactonizing enzyme I; MLE; Muconate cycloisomerase I; EC 5.5.1.1 from Pseudomonas putida (Arthrobacter siderocapsulatus)
PFams: MR_MLE_N, MR_MLE_C
375 amino acids: PaperBLAST, CDD

TFDD_DELAC / Q9RNZ9 Chloromuconate cycloisomerase; EC 5.5.1.7 from Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans)
PFams: MR_MLE_N, MR_MLE_C, MAAL_C
370 amino acids: PaperBLAST, CDD, SwissProt::Q9RNZ9
44% identical to

P08310 muconate lactonizing enzyme subunit (EC 5.5.1.1) from Pseudomonas putida
CATB_PSEPU / P08310 Muconate cycloisomerase 1; Cis,cis-muconate lactonizing enzyme I; MLE; Muconate cycloisomerase I; EC 5.5.1.1 from Pseudomonas putida (Arthrobacter siderocapsulatus)
PFams: MR_MLE_N, MR_MLE_C
375 amino acids: PaperBLAST, CDD

Q8G9L1 chloromuconate cycloisomerase 2 monomer (EC 5.5.1.7) from Rhodococcus opacus
Q8G9L1 Chloromuconate cycloisomerase (EC 5.5.1.7) from Rhodococcus opacus
PFams: MR_MLE_N, MR_MLE_C, MAAL_C
371 amino acids: PaperBLAST, CDD, metacyc::MONOMER-14664
43% identical to

P08310 muconate lactonizing enzyme subunit (EC 5.5.1.1) from Pseudomonas putida
CATB_PSEPU / P08310 Muconate cycloisomerase 1; Cis,cis-muconate lactonizing enzyme I; MLE; Muconate cycloisomerase I; EC 5.5.1.1 from Pseudomonas putida (Arthrobacter siderocapsulatus)
PFams: MR_MLE_N, MR_MLE_C
375 amino acids: PaperBLAST, CDD

Q706U0 chloromuconate cycloisomerase subunit (EC 5.5.1.7; EC 5.5.1.11) from Pseudomonas putida
PFams: MR_MLE_N, MR_MLE_C, MAAL_C
370 amino acids: PaperBLAST, CDD, metacyc::MONOMER-14404
43% identical to

PS417_23670 Muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas simiae WCS417
PFams: MR_MLE_N, MR_MLE_C
375 amino acids: PaperBLAST, CDD

P05404 chloromuconate cycloisomerase subunit (EC 5.5.1.7; EC 5.5.1.11) from Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
PFams: MR_MLE_N, MR_MLE_C
370 amino acids: PaperBLAST, CDD, metacyc::MONOMER-14403
42% identical to

P08310 muconate lactonizing enzyme subunit (EC 5.5.1.1) from Pseudomonas putida
CATB_PSEPU / P08310 Muconate cycloisomerase 1; Cis,cis-muconate lactonizing enzyme I; MLE; Muconate cycloisomerase I; EC 5.5.1.1 from Pseudomonas putida (Arthrobacter siderocapsulatus)
PFams: MR_MLE_N, MR_MLE_C
375 amino acids: PaperBLAST, CDD

P42428 dienelactone hydrolase II subunit (EC 5.5.1.7) from Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
PFams: MR_MLE_N, MR_MLE_C
372 amino acids: PaperBLAST, CDD, metacyc::MONOMER-14413
43% identical to

P08310 muconate lactonizing enzyme subunit (EC 5.5.1.1) from Pseudomonas putida
CATB_PSEPU / P08310 Muconate cycloisomerase 1; Cis,cis-muconate lactonizing enzyme I; MLE; Muconate cycloisomerase I; EC 5.5.1.1 from Pseudomonas putida (Arthrobacter siderocapsulatus)
PFams: MR_MLE_N, MR_MLE_C
375 amino acids: PaperBLAST, CDD