Clusters of Characterized Proteins

Clustering the characterized proteins for ecfA1 (energy-coupling factor transporter, ATPase 1 (A1) component) in L-tryptophan catabolism

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Definition of ecfA1

• UniProt sequence P40735: RecName: Full=Energy-coupling factor transporter ATP-binding protein EcfA1 {ECO:0000255|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000255|HAMAP-Rule:MF_01710}; EC=7.-.-.- {ECO:0000255|HAMAP-Rule:MF_01710};
• Ignore hits to Q839D5 when looking for 'other' hits (Cobalt import ATP-binding protein CbiO 1, component of ATP-dependent folic acid uptake porter, FolT/EcfT/EcfA1/EcfA2)
• Ignore hits to Q035B2 when looking for 'other' hits (Energy-coupling factor transporter ATP-binding protein EcfA1; ECF transporter A component EcfA; EC 7.-.-.-)
• Ignore hits to A2RI01 when looking for 'other' hits (Energy-coupling factor transporter ATP-binding protein EcfA1; ECF transporter A component EcfA; EC 7.-.-.-. Energy-coupling factor transporter ATP-binding protein EcfA 1, component of The biotin uptake system, BioMNY. The 3-d structure of the EcfS subunit, BioY, at 2.1Å resolution is known (Berntsson et al., 2012). BioY and ThiT from L. lactis)
• Ignore hits to Q5M243 when looking for 'other' hits (Energy-coupling factor transporter ATP-binding protein EcfA1; ECF transporter A component EcfA1; EC 7.-.-.-. Energy-coupling factor transporter ATP-binding protein EcfA 2, component of Riboflavin ECF transport system, EcfAA'T/RibU)
• Ignore hits to Q03PY5 when looking for 'other' hits (Energy-coupling factor transporter ATP-binding protein EcfA1, component of The folate transporter, FolT/EcfAA''T (The 3-d structure is known to 3.0Å resolution (Xu et al. 2013; 4HUQ))
• Ignore hits to G12WB-158-MONOMER when looking for 'other' hits (energy-coupling factor transporter ATP-bindind protein 1)
• Ignore hits to Q03ZL6 when looking for 'other' hits (Energy-coupling factor transporter ATP-binding protein EcfA1; ECF transporter A component EcfA1; EC 7.-.-.-)
• Comment: Orthologs may be annotated as ecfA1 or cbiO; these have the same function (but might not be part of a tryptophan transporting system).

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (0/1 heteromeric)

P40735 Energy-coupling factor transporter ATP-binding protein EcfA1 {ECO:0000255|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000255|HAMAP-Rule:MF_01710}; EC=7.-.-.- {ECO:0000255|HAMAP-Rule:MF_01710}
281 amino acids: PaperBLAST, CDD