Other Characterized Proteins Similar to ecfA2

GapMind for catabolism of small carbon sources

Other Characterized Proteins Similar to ecfA2

Finding the characterized proteins for ecfA2 (energy-coupling factor transporter, ATPase 2 (A2) component) in L-tryptophan catabolism

Or see clustering for step ecfA2

Or see all steps for L-tryptophan catabolism

Or cluster curated proteins matching a keyword

Definition of ecfA2

UniProt sequence P70970: RecName: Full=Energy-coupling factor transporter ATP-binding protein EcfA2 {ECO:0000255|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA2 {ECO:0000255|HAMAP-Rule:MF_01710}; EC=7.-.-.- {ECO:0000255|HAMAP-Rule:MF_01710}; AltName: Full=ECF transporter A component EcfA';
Ignore hits to Q839D4 when looking for 'other' hits (Cobalt import ATP-binding protein CbiO 2, component of ATP-dependent folic acid uptake porter, FolT/EcfT/EcfA1/EcfA2)
Ignore hits to Q5M244 when looking for 'other' hits (Energy-coupling factor transporter ATP-binding protein EcfA2; ECF transporter A component EcfA2; EC 3.6.3.-. Energy-coupling factor transporter ATP-binding protein EcfA 1, component of Riboflavin ECF transport system, EcfAA'T/RibU)
Ignore hits to A2RI02 when looking for 'other' hits (Energy-coupling factor transporter ATP-binding protein EcfA2; ECF transporter A component EcfA2; ECF transporter A component EcfA'; EC 3.6.3.-)
Ignore hits to Q035B3 when looking for 'other' hits (Energy-coupling factor transporter ATP-binding protein EcfA2; ECF transporter A component EcfA2; ECF transporter A component EcfA'; EC 3.6.3.-)
Ignore hits to Q03PY6 when looking for 'other' hits (Energy-coupling factor transporter ATP-binding protein EcfA2, component of The folate transporter, FolT/EcfAA''T (The 3-d structure is known to 3.0Å resolution (Xu et al. 2013; 4HUQ))
Ignore hits to G12WB-159-MONOMER when looking for 'other' hits (energy-coupling factor transporter ATP-bindind protein 2)
Ignore hits to Q03ZL5 when looking for 'other' hits (Energy-coupling factor transporter ATP-binding protein EcfA2; ECF transporter A component EcfA2; ECF transporter A component EcfA'; EC 3.6.3.-)
Comment: Orthologs may be annotated as ecfA2 or cbiO2; these have the same function

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 12 other characterized sequences. (Found 12 hits including self hits.)

Removing ignored items reduces this to 5 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for ecfA2.)

CBIO_RHOCB / O68106 Cobalt import ATP-binding protein CbiO; Energy-coupling factor transporter ATP-binding protein CbiO; ECF transporter A component CbiO; EC 7.2.2.- from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
TC 3.A.1.23.8 / O68106 Cobalt import ATP-binding protein CbiO, component of Ni2+/Co2+ uptake porter, CbiMNOQ (CbiM, 222 aas, 5 TMSs; CbiN, 103 aas, 2 TMSs; CbiO, 280 aas, 0 TMSs; CbiQ, 244 aas, 5 TMSs) from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
PFams: ABC_tran, AAA_21
Heteromeric, 280 amino acids: PaperBLAST, CDD, SwissProt::O68106
42% identical to

P70970 Energy-coupling factor transporter ATP-binding protein EcfA2 {ECO:0000255|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA2 {ECO:0000255|HAMAP-Rule:MF_01710}; EC=7.-.-.- {ECO:0000255|HAMAP-Rule:MF_01710}; ECF transporter A component EcfA'
276 amino acids: PaperBLAST, CDD

ARTM_BACSU / P54537 Arginine transport ATP-binding protein ArtM from Bacillus subtilis (strain 168)
PFams: ABC_tran, AAA_21
240 amino acids: PaperBLAST, CDD, SwissProt::P54537
43% identical to

TC 3.A.1.26.5 / A7NRG0 ABC transporter related, component of ThiW/CbiQ/CbiO homologues (ThiW: 174 aas; 5 putative TMSs) from Roseiflexus castenholzii (strain DSM 13941 / HLO8)
PFams: ABC_tran, ABC_tran
Heteromeric, 526 amino acids: PaperBLAST, CDD, TCDB::A7NRG0
40% identical to

b1917 cystine ABC transporter ATP binding subunit (EC 7.4.2.12) from Escherichia coli K-12 substr. MG1655
P37774 cystine ABC transporter ATP binding subunit (EC 7.4.2.12) from Escherichia coli (strain K12)
YECC_ECOLI / P37774 L-cystine transport system ATP-binding protein YecC; EC 7.4.2.- from Escherichia coli (strain K12)
TC 3.A.1.3.10 / P37774 YECC aka CysZ aka B1917, component of Cystine/cysteine/diaminopimelate transporter, CysXYZ; these proteins are also designated FliY/YecS/YecC from Escherichia coli
PFams: ABC_tran, AAA_22
Heteromeric, 250 amino acids: PaperBLAST, CDD, SwissProt::P37774
41% identical to

ECFA1_THEMA / Q9X1Z1 Energy-coupling factor transporter ATP-binding protein EcfA1; ECF transporter A component EcfA1; EC 7.-.-.- from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
TC 3.A.1.25.5 / Q9X1Z1 Energy-coupling factor transporter ATP-binding protein EcfA, component of Biotin/Riboflavin ECF transport system, EcfAA'T/RibU/BioY (Karpowich and Wang 2013). RibU binds riboflavin with high affinity, and the protein-substrate complex is exceptionally stable in solution. The crystal structure of riboflavin-bound RibU reveals an electronegative binding pocket at the extracellular surface in which the substrate is completely buried from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: ABC_tran, AAA_21, AAA_21
Heteromeric, 259 amino acids: PaperBLAST, CDD, SwissProt::Q9X1Z1
40% identical to

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for ecfA2.)

TC 3.A.1.26.10 / TC 3.A.1.26.7 / Q839D4 Cobalt import ATP-binding protein CbiO 2, component of ATP-dependent folic acid uptake porter, FolT/EcfT/EcfA1/EcfA2 from Enterococcus faecalis
PFams: ABC_tran, AAA_21
Heteromeric, 289 amino acids: PaperBLAST, CDD, TCDB::Q839D4
58% identical to

ECFA2_STRT2 / Q5M244 Energy-coupling factor transporter ATP-binding protein EcfA2; ECF transporter A component EcfA2; EC 3.6.3.- from Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)
TC 3.A.1.25.6 / Q5M244 Energy-coupling factor transporter ATP-binding protein EcfA 1, component of Riboflavin ECF transport system, EcfAA'T/RibU from Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)
PFams: ABC_tran, AAA_21
Heteromeric, 280 amino acids: PaperBLAST, CDD, SwissProt::Q5M244
58% identical to

ECFA2_LACLM / A2RI02 Energy-coupling factor transporter ATP-binding protein EcfA2; ECF transporter A component EcfA2; ECF transporter A component EcfA'; EC 3.6.3.- from Lactococcus lactis subsp. cremoris (strain MG1363)
PFams: ABC_tran, AAA_21
288 amino acids: PaperBLAST, CDD, SwissProt::A2RI02
53% identical to

ECFA2_LACP3 / Q035B3 Energy-coupling factor transporter ATP-binding protein EcfA2; ECF transporter A component EcfA2; ECF transporter A component EcfA'; EC 3.6.3.- from Lactobacillus paracasei (strain ATCC 334 / BCRC 17002 / CIP 107868 / KCTC 3260 / NRRL B-441)
PFams: ABC_tran, AAA_21
288 amino acids: PaperBLAST, CDD, SwissProt::Q035B3
54% identical to

TC 3.A.1.26.9 / TC 3.A.1.28.2 / Q03PY6 Energy-coupling factor transporter ATP-binding protein EcfA2, component of The folate transporter, FolT/EcfAA''T (The 3-d structure is known to 3.0Å resolution (Xu et al. 2013; 4HUQ) from Lactobacillus brevis (strain ATCC 367 / JCM 1170)
PFams: ABC_tran, AAA_21
Heteromeric, 290 amino acids: PaperBLAST, CDD, TCDB::Q03PY6
54% identical to

Q18CI9 energy-coupling factor transporter ATP-bindind protein 2 from Clostridioides difficile (strain 630)
PFams: ABC_tran, AAA_21
288 amino acids: PaperBLAST, CDD, metacyc::G12WB-159-MONOMER
48% identical to

ECFA2_LEUMM / Q03ZL5 Energy-coupling factor transporter ATP-binding protein EcfA2; ECF transporter A component EcfA2; ECF transporter A component EcfA'; EC 3.6.3.- from Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523)
PFams: ABC_tran
285 amino acids: PaperBLAST, CDD, SwissProt::Q03ZL5
47% identical to