Clusters of Characterized Proteins

Clustering the characterized proteins for ecfT (energy-coupling factor transporter, transmembrane (T) component) in L-tryptophan catabolism

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Definition of ecfT

• Curated sequence P70972: Energy-coupling factor transporter transmembrane protein EcfT; ECF transporter T component EcfT
• Ignore hits to I7BV49 when looking for 'other' hits (Energy-coupling factor transporter transmembrane protein EcfT, component of ATP-dependent folic acid uptake porter, FolT/EcfT/EcfA1/EcfA2)
• Ignore hits to Q5M245 when looking for 'other' hits (Energy-coupling factor transporter transmembrane protein EcfT; ECF transporter T component EcfT. Energy-coupling factor transporter transmembrane protein EcfT, component of Riboflavin ECF transport system, EcfAA'T/RibU)
• Ignore hits to A2RI03 when looking for 'other' hits (Energy-coupling factor transporter transmembrane protein EcfT; ECF transporter T component EcfT. Energy-coupling factor transporter transmembrane protein EcfT, component of The biotin uptake system, BioMNY. The 3-d structure of the EcfS subunit, BioY, at 2.1Å resolution is known (Berntsson et al., 2012). BioY and ThiT from L. lactis)
• Ignore hits to Q035B4 when looking for 'other' hits (Energy-coupling factor transporter transmembrane protein EcfT; ECF transporter T component EcfT)
• Ignore hits to G12WB-160-MONOMER when looking for 'other' hits (energy-coupling factor transporter transmembrane protein EcfT)
• Ignore hits to Q03PY7 when looking for 'other' hits (Energy-coupling factor transporter transmembrane protein EcfT, component of The folate transporter, FolT/EcfAA''T (The 3-d structure is known to 3.0Å resolution (Xu et al. 2013; 4HUQ))
• Ignore hits to Q03ZL4 when looking for 'other' hits (Energy-coupling factor transporter transmembrane protein EcfT; ECF transporter T component EcfT)
• Comment: Ignore EcfT proteins from other bacteria

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by cluster

Bacillus subtilis

ECFT_BACSU / P70972 Energy-coupling factor transporter transmembrane protein EcfT; ECF transporter T component EcfT from Bacillus subtilis (strain 168)
PFams: CbiQ
265 amino acids: PaperBLAST, CDD (Singleton 1)