GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for nbaD (2-amino-3-carboxymuconate-6-semialdehyde decarboxylase) in L-tryptophan catabolism

Or see other characterized proteins similar to nbaD

Or see all steps for L-tryptophan catabolism

Or cluster curated proteins matching a keyword

Definition of nbaD

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Geobacillus thermodenitrificans

A4IT47 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45) from Geobacillus thermodenitrificans (strain NG80-2)
PFams: Amidohydro_2
336 amino acids: PaperBLAST, CDD (Cluster 1)

Homo sapiens

ACMSD_HUMAN / Q8TDX5 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Picolinate carboxylase; EC 4.1.1.45 from Homo sapiens (Human)
Q8TDX5 aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Homo sapiens
Q8TDX5 aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Homo sapiens
PFams: Amidohydro_2
336 amino acids: PaperBLAST, CDD (Cluster 1)

Mus musculus

ACMSD_MOUSE / Q8R519 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Picolinate carboxylase; EC 4.1.1.45 from Mus musculus (Mouse)
Q8R519 aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Mus musculus
PFams: Amidohydro_2
336 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas fluorescens

Q83V25 aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Pseudomonas fluorescens
Q83V25 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase (EC 4.1.1.45) from Pseudomonas fluorescens
PFams: Amidohydro_2
334 amino acids: PaperBLAST, CDD (Cluster 1)

Rattus norvegicus

ACMSD_RAT / Q8R5M5 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Picolinate carboxylase; EC 4.1.1.45 from Rattus norvegicus (Rat)
Q8R5M5 aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Rattus norvegicus
PFams: Amidohydro_2
336 amino acids: PaperBLAST, CDD (Cluster 1)