GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to pccB

Finding the characterized proteins for pccB (propionyl-CoA carboxylase, beta subunit) in L-valine catabolism

Or see clustering for step pccB

Or see all steps for L-valine catabolism

Or cluster curated proteins matching a keyword

Definition of pccB

Fetched 16 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 14 other characterized sequences. (Found 30 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for pccB.)

Q8J2Z5 acetyl-CoA carboxylase (EC 6.4.1.2) from Metallosphaera sedula
A4YGI1 acyl CoA carboxylase carboxyltransferase subunit from Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2)
PFams: Carboxyl_trans
524 amino acids: PaperBLAST, CDD, BRENDA::Q8J2Z5
82% identical to

Q877I3 acetyl-CoA carboxylase (subunit 1/3) (EC 6.4.1.2); propionyl-CoA carboxylase (subunit 2/3) (EC 6.4.1.3) from Acidianus brierleyi
Q877I3 acyl CoA carboxylase carboxyltransferase subunit (EC 2.1.3.15; EC 6.4.1.3; EC 6.3.4.14) from Acidianus brierleyi
PFams: Carboxyl_trans
Heteromeric, 524 amino acids: PaperBLAST, CDD

Q9I297 methylcrotonoyl-CoA carboxylase (EC 6.4.1.4) from Pseudomonas aeruginosa
Q9I297 methylcrotonyl-CoA carboxylase β-subunit (EC 6.4.1.4) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
PFams: Carboxyl_trans
Heteromeric, 535 amino acids: PaperBLAST, CDD, BRENDA::Q9I297
68% identical to

A9WEI4 propionyl-CoA carboxylase α subunit (EC 6.4.1.3) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
PFams: Carboxyl_trans
Heteromeric, 535 amino acids: PaperBLAST, CDD

Psest_1083 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) from Pseudomonas stutzeri RCH2
PFams: Carboxyl_trans
Heteromeric, 535 amino acids: PaperBLAST, CDD, reanno::psRCH2:GFF1050
66% identical to

A9WEI4 propionyl-CoA carboxylase α subunit (EC 6.4.1.3) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
PFams: Carboxyl_trans
Heteromeric, 535 amino acids: PaperBLAST, CDD

Sama_1361 Methylcrotonoyl-CoA carboxylase (EC 6.4.1.4) from Shewanella amazonensis SB2B
PFams: Carboxyl_trans
535 amino acids: PaperBLAST, CDD, reanno::SB2B:6937191
66% identical to

A9WEI4 propionyl-CoA carboxylase α subunit (EC 6.4.1.3) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
PFams: Carboxyl_trans
Heteromeric, 535 amino acids: PaperBLAST, CDD

AO356_01585 Methylcrotonoyl-CoA carboxylase (EC 6.4.1.4) from Pseudomonas fluorescens FW300-N2C3
PFams: Carboxyl_trans
535 amino acids: PaperBLAST, CDD, reanno::pseudo5_N2C3_1:AO356_01585
65% identical to

A9WEI4 propionyl-CoA carboxylase α subunit (EC 6.4.1.3) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
PFams: Carboxyl_trans
Heteromeric, 535 amino acids: PaperBLAST, CDD

Pf6N2E2_2192 Methylcrotonoyl-CoA carboxylase (EC 6.4.1.4) from Pseudomonas fluorescens FW300-N2E2
PFams: Carboxyl_trans
535 amino acids: PaperBLAST, CDD, reanno::pseudo6_N2E2:Pf6N2E2_2192
65% identical to

A9WEI4 propionyl-CoA carboxylase α subunit (EC 6.4.1.3) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
PFams: Carboxyl_trans
Heteromeric, 535 amino acids: PaperBLAST, CDD

SM_b21122 Methylcrotonoyl-CoA carboxylase (EC 6.4.1.4) from Sinorhizobium meliloti 1021
PFams: Carboxyl_trans
535 amino acids: PaperBLAST, CDD, reanno::Smeli:SM_b21122
65% identical to

A9WEI4 propionyl-CoA carboxylase α subunit (EC 6.4.1.3) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
PFams: Carboxyl_trans
Heteromeric, 535 amino acids: PaperBLAST, CDD

MCCB_HUMAN / Q9HCC0 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; MCCase subunit beta; 3-methylcrotonyl-CoA carboxylase 2; 3-methylcrotonyl-CoA carboxylase non-biotin-containing subunit; 3-methylcrotonyl-CoA:carbon dioxide ligase subunit beta; EC 6.4.1.4 from Homo sapiens (Human)
Q9HCC0 3-methylcrotonyl-CoA carboxylase β subunit (EC 6.4.1.4) from Homo sapiens
PFams: Carboxyl_trans
Heteromeric, 563 amino acids: PaperBLAST, CDD, SwissProt::Q9HCC0
62% identical to

A9WEI4 propionyl-CoA carboxylase α subunit (EC 6.4.1.3) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
PFams: Carboxyl_trans
Heteromeric, 535 amino acids: PaperBLAST, CDD

MCCB_DROME / Q9V9A7 Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; MCCase subunit beta; 3-methylcrotonyl-CoA carboxylase 2; 3-methylcrotonyl-CoA carboxylase non-biotin-containing subunit; 3-methylcrotonyl-CoA:carbon dioxide ligase subunit beta; EC 6.4.1.4 from Drosophila melanogaster (Fruit fly)
PFams: Carboxyl_trans
578 amino acids: PaperBLAST, CDD, SwissProt::Q9V9A7
61% identical to

A9WEI4 propionyl-CoA carboxylase α subunit (EC 6.4.1.3) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
PFams: Carboxyl_trans
Heteromeric, 535 amino acids: PaperBLAST, CDD

TC 3.B.1.1.2 / Q57079 Alpha-subunit,methylmalonyl-CoA decarboxylase, component of Na+-transporting methylmalonyl-CoA decarboxylase from Veillonella parvula
PFams: Carboxyl_trans, MdcE
Heteromeric, 509 amino acids: PaperBLAST, CDD, TCDB::Q57079
60% identical to

PCCB_HALMT / I3R7F1 Propionyl-CoA carboxylase, carboxyltransferase subunit; PCC; EC 6.4.1.3 from Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) (Halobacterium mediterranei)
I3R7F1 propionyl-CoA carboxylase (subunit 2/3) (EC 6.4.1.3) from Haloferax mediterranei
PFams: Carboxyl_trans
Heteromeric, 516 amino acids: PaperBLAST, CDD

Q9LDD8 methylcrotonoyl-CoA carboxylase (EC 6.4.1.4) from Arabidopsis thaliana
PFams: Carboxyl_trans
587 amino acids: PaperBLAST, CDD, BRENDA::Q9LDD8
59% identical to

A9WEI4 propionyl-CoA carboxylase α subunit (EC 6.4.1.3) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
PFams: Carboxyl_trans
Heteromeric, 535 amino acids: PaperBLAST, CDD

CH_122289 non-biotin containing subunit of 3-methylcrotonyl-CoA carboxylase; EC 6.4.1.4 from Emericella nidulans
PFams: Carboxyl_trans
587 amino acids: PaperBLAST, CDD, CharProtDB::CH_122289
57% identical to

A9WEI4 propionyl-CoA carboxylase α subunit (EC 6.4.1.3) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
PFams: Carboxyl_trans
Heteromeric, 535 amino acids: PaperBLAST, CDD

Q8GBW6 methylmalonyl-CoA carboxyltransferase 12S subunit (EC 2.1.3.1) from Propionibacterium freudenreichii subsp. shermanii
PFams: Carboxyl_trans, MdcE
Heteromeric, 611 amino acids: PaperBLAST, CDD, metacyc::MONOMER-12429
54% identical to

PCCB_HALMT / I3R7F1 Propionyl-CoA carboxylase, carboxyltransferase subunit; PCC; EC 6.4.1.3 from Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) (Halobacterium mediterranei)
I3R7F1 propionyl-CoA carboxylase (subunit 2/3) (EC 6.4.1.3) from Haloferax mediterranei
PFams: Carboxyl_trans
Heteromeric, 516 amino acids: PaperBLAST, CDD

Q9HZV9 geranoyl-CoA carboxylase (EC 6.4.1.5) from Pseudomonas aeruginosa
Q9HZV9 cis-geranyl-CoA carboxylase β-subunit (EC 6.4.1.5) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
PFams: Carboxyl_trans
Heteromeric, 538 amino acids: PaperBLAST, CDD, BRENDA::Q9HZV9
42% identical to

A9WEI4 propionyl-CoA carboxylase α subunit (EC 6.4.1.3) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
PFams: Carboxyl_trans
Heteromeric, 535 amino acids: PaperBLAST, CDD