GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for Dshi_0548 (xylitol ABC transporter, permease component 1) in xylitol catabolism

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Definition of Dshi_0548

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by cluster

Dinoroseobacter shibae

Dshi_0548 ABC transporter for Xylitol, permease component 1 from Dinoroseobacter shibae DFL-12
PFams: BPD_transp_1
Heteromeric, 288 amino acids: PaperBLAST, CDD (Singleton 1)