GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for EIIB-Axl (xylitol PTS, enzyme IIB (EIIB-Axl)) in xylitol catabolism

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Definition of EIIB-Axl

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by cluster

Listeria monocytogenes

TC 4.A.5.1.2 / Q71WA5 Putative PTS system, galactitol-specific, IIB component, component of Pentitol [arabitol (arabinitol, lyxitol)/xylitol] PTS permease, IICBA (encoded within an operon that also encodes a polyol-P dehydrogenase, a ribose-5-P isomerase, a ribulose 5-P-3-epimerase, and a BlgG-type PTS antiterminator) (Saklani-Jusforgues et al., 2001; Kentache T et al., 2016, in press) from Listeria monocytogenes serotype 4b (strain F2365)
PFams: PTS_IIB
Heteromeric, 93 amino acids: PaperBLAST, CDD (Singleton 1)