GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to PS417_12065

Finding the characterized proteins for PS417_12065 (xylitol ABC transporter, ATPase component) in xylitol catabolism

Or see clustering for step PS417_12065

Or see all steps for xylitol catabolism

Or cluster curated proteins matching a keyword

Definition of PS417_12065

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 7 other characterized sequences. (Found 7 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for PS417_12065.)

AO353_21385 m-Inositol ABC transporter, ATPase component (itaA) from Pseudomonas fluorescens FW300-N2E3
PFams: ABC_tran, ABC_tran
Heteromeric, 521 amino acids: PaperBLAST, CDD, reanno::pseudo3_N2E3:AO353_21385
44% identical to

A0A1N7TX47 D-ribose transporter ATP-binding protein; SubName: Full=Putative xylitol transport system ATP-binding protein; SubName: Full=Sugar ABC transporter ATP-binding protein
495 amino acids: PaperBLAST, CDD

PS417_11890 Inositol transport system ATP-binding protein from Pseudomonas simiae WCS417
PFams: ABC_tran, ABC_tran
517 amino acids: PaperBLAST, CDD, reanno::WCS417:GFF2332
44% identical to

A0A1N7TX47 D-ribose transporter ATP-binding protein; SubName: Full=Putative xylitol transport system ATP-binding protein; SubName: Full=Sugar ABC transporter ATP-binding protein
495 amino acids: PaperBLAST, CDD

b3749 ribose ABC transporter ATP binding subunit from Escherichia coli K-12 substr. MG1655
RBSA_ECOLI / P04983 Ribose import ATP-binding protein RbsA; EC 7.5.2.7 from Escherichia coli (strain K12)
TC 3.A.1.2.1 / P04983 RbsA aka B3749, component of Ribose porter from Escherichia coli
P04983 ribose ABC transporter ATP binding subunit from Escherichia coli (strain K12)
GB|AAC76772.1 ribose transport, ATP-binding protein RbsA; EC 3.6.3.17 from Escherichia coli K12
PFams: ABC_tran, ABC_tran
Heteromeric, 501 amino acids: PaperBLAST, CDD, CharProtDB::CH_003578
42% identical to

A0A1N7TX47 D-ribose transporter ATP-binding protein; SubName: Full=Putative xylitol transport system ATP-binding protein; SubName: Full=Sugar ABC transporter ATP-binding protein
495 amino acids: PaperBLAST, CDD

TC 3.A.1.2.13 / A6VKS8 RbsA, component of The probable autoinducer-2 (AI-2;, a furanosyl borate diester: 3aS,6S,6aR)-2,2,6,6a-tetrahydroxy-3a-methyltetrahydrofuro[3,2-d][1,3,2]dioxaborolan-2-uide) uptake porter (Shao et al., 2007) (50-70% identical to RbsABC of E. coli; TC# 3.A.1.2.1) from Actinobacillus succinogenes (strain ATCC 55618 / 130Z)
PFams: ABC_tran, ABC_tran
Heteromeric, 500 amino acids: PaperBLAST, CDD, TCDB::A6VKS8
40% identical to

A0A1N7TX47 D-ribose transporter ATP-binding protein; SubName: Full=Putative xylitol transport system ATP-binding protein; SubName: Full=Sugar ABC transporter ATP-binding protein
495 amino acids: PaperBLAST, CDD

TC 3.A.1.2.11 / Q92WK2 EryE aka RB0337, component of The erythritol permease, EryEFG (Geddes et al., 2010) (probably orthologous to 3.A.1.2.16) from Rhizobium meliloti (Sinorhizobium meliloti)
PFams: ABC_tran, ABC_tran
Heteromeric, 516 amino acids: PaperBLAST, CDD, TCDB::Q92WK2
40% identical to

A0A1N7TX47 D-ribose transporter ATP-binding protein; SubName: Full=Putative xylitol transport system ATP-binding protein; SubName: Full=Sugar ABC transporter ATP-binding protein
495 amino acids: PaperBLAST, CDD

TC 3.A.1.2.19 / Q9X051 Ribose import ATP-binding protein RbsA 2, component of D-ribose porter (Nanavati et al., 2006). Induced by ribose from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: ABC_tran, ABC_tran
Heteromeric, 523 amino acids: PaperBLAST, CDD, TCDB::Q9X051
40% identical to

A0A1N7TX47 D-ribose transporter ATP-binding protein; SubName: Full=Putative xylitol transport system ATP-binding protein; SubName: Full=Sugar ABC transporter ATP-binding protein
495 amino acids: PaperBLAST, CDD

b1900 arabinose ABC transporter ATP binding subunit (EC 7.5.2.13; EC 7.5.2.12) from Escherichia coli K-12 substr. MG1655
ARAG_ECOLI / P0AAF3 Arabinose import ATP-binding protein AraG; EC 7.5.2.12 from Escherichia coli (strain K12)
TC 3.A.1.2.2 / P0AAF3 Arabinose import ATP-binding protein AraG aka B1900, component of Arabinose porter from Escherichia coli
P0AAF3 arabinose ABC transporter ATP binding subunit (EC 7.5.2.13) from Escherichia coli (strain K12)
RF|NP_416413.1 L-arabinose ABC transporter, ATP-binding protein AraG; EC 3.6.3.17 from Escherichia coli K12
PFams: ABC_tran, ABC_tran
Heteromeric, 504 amino acids: PaperBLAST, CDD, CharProtDB::CH_014279
40% identical to

A0A1N7TX47 D-ribose transporter ATP-binding protein; SubName: Full=Putative xylitol transport system ATP-binding protein; SubName: Full=Sugar ABC transporter ATP-binding protein
495 amino acids: PaperBLAST, CDD