GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for aldox-large ((glycol)aldehyde oxidoreductase, large subunit) in D-xylose catabolism

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Definition of aldox-large

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 748-749 amino acids (heteromeric)

The first sequence in each cluster is the seed.

CUTA_SULAC / Q4J6M3 Glyceraldehyde dehydrogenase large chain; Glyceraldehyde dehydrogenase subunit A; Glyceraldehyde dehydrogenase subunit alpha; EC from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
PFams: Ald_Xan_dh_C, Ald_Xan_dh_C2
Heteromeric, 748 amino acids: PaperBLAST, CDD, Compare to cluster

Q97VI4 glycolaldehyde oxidoreductase large subunit from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
PFams: Ald_Xan_dh_C, Ald_Xan_dh_C2
Heteromeric, 749 amino acids: PaperBLAST, CDD, Compare to cluster