Clustering the characterized proteins for glcB (malate synthase) in D-xylose catabolism
Or see other characterized proteins similar to glcB
Or see all steps for D-xylose catabolism
Or cluster curated proteins matching a keyword
Definition of glcB
Fetched 22 sequences
Running BLASTp
Found similarities, at above 30% identity and 75% coverage, for 19 of these sequences
Found 3 clusters of similar sequences. Another 3 sequences are not clustered. Download as table or as draft rules or view by organism
Q5YLB8 malate synthase (EC 2.3.3.9) from Paracoccidioides brasiliensis
PFams: Malate_synthase
539 amino acids: PaperBLAST, CDD, Compare to cluster
Q9ZH77 malate synthase (EC 2.3.3.9) from Streptomyces clavuligerus
PFams: Malate_synthase
541 amino acids: PaperBLAST, CDD, Compare to cluster
CH_122247 malate synthase; EC 2.3.3.9 from Emericella nidulans
PFams: Malate_synthase
528 amino acids: PaperBLAST, CDD, Compare to cluster
CH_123427 malate synthase; EC 2.3.3.9 from Candida albicans
PFams: Malate_synthase
551 amino acids: PaperBLAST, CDD, Compare to cluster
P21826 malate synthase 2 (EC 2.3.3.7; EC 2.3.3.9) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
MLS2_YEAST / P21826 Malate synthase 2; Degradation of allantoin protein 7; EC 2.3.3.9 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: Malate_synthase
554 amino acids: PaperBLAST, CDD, Compare to cluster
P30952 malate synthase (EC 2.3.3.7; EC 2.3.3.9) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
MLS1_YEAST / P30952 Malate synthase 1; EC 2.3.3.9 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: Malate_synthase
554 amino acids: PaperBLAST, CDD, Compare to cluster
MASY_ORYSJ / Q7XUG1 Malate synthase; EC 2.3.3.9 from Oryza sativa subsp. japonica (Rice)
PFams: Malate_synthase
567 amino acids: PaperBLAST, CDD, Compare to cluster
MASY_DICDI / Q8T2K9 Malate synthase; EC 2.3.3.9 from Dictyostelium discoideum (Slime mold)
PFams: Malate_synthase
543 amino acids: PaperBLAST, CDD, Compare to cluster
Q9LZC3 malate synthase (EC 2.3.3.9) from Arabidopsis thaliana
MASY_ARATH / Q9LZC3 Malate synthase; EC 2.3.3.9 from Arabidopsis thaliana (Mouse-ear cress)
PFams: Malate_synthase
562 amino acids: PaperBLAST, CDD, Compare to cluster
b4014 malate synthase A (EC 2.3.3.9) from Escherichia coli K-12 substr. MG1655
P08997 malate synthase A (EC 2.3.3.9) from Escherichia coli (strain K12)
PFams: Malate_synthase
533 amino acids: PaperBLAST, CDD, Compare to cluster
BPHYT_RS12305 Malate synthase (EC 2.3.3.9) from Burkholderia phytofirmans PsJN
PFams: Malate_synthase
536 amino acids: PaperBLAST, CDD, Compare to cluster
SO1483 Malate synthase (EC 2.3.3.9) from Shewanella oneidensis MR-1
PFams: Malate_synthase
549 amino acids: PaperBLAST, CDD, Compare to cluster
MASZ_CORGL / P42450 Malate synthase G; EC 2.3.3.9 from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
P42450 malate synthase (EC 2.3.3.9) from Corynebacterium glutamicum
PFams: Malate_synthase
739 amino acids: PaperBLAST, CDD, Compare to cluster
P9WK17 malate synthase G (EC 2.3.3.9) from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
MASZ_MYCTO / P9WK16 Malate synthase G; EC 2.3.3.9 from Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
MASZ_MYCTU / P9WK17 Malate synthase G; EC 2.3.3.9 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WK17 malate synthase (EC 2.3.3.9) from Mycobacterium tuberculosis
PFams: Malate_synthase
741 amino acids: PaperBLAST, CDD, Compare to cluster
MASZ_MYCLB / B8ZSN3 Malate synthase G; EC 2.3.3.9 from Mycobacterium leprae (strain Br4923)
PFams: Malate_synthase
731 amino acids: PaperBLAST, CDD, Compare to cluster
b2976 malate synthase G (EC 2.3.3.9) from Escherichia coli K-12 substr. MG1655
P37330 malate synthase G (EC 2.3.3.9) from Escherichia coli (strain K12)
MASZ_ECOLI / P37330 Malate synthase G; MSG; EC 2.3.3.9 from Escherichia coli (strain K12)
PFams: Malate_synthase
723 amino acids: PaperBLAST, CDD, Compare to cluster
Psest_0354 Malate synthase G (EC 2.3.3.9) from Pseudomonas stutzeri RCH2
PFams: Malate_synthase
726 amino acids: PaperBLAST, CDD, Compare to cluster
Q8N0X4 malate/β-methylmalate synthase (EC 2.3.3.9) from Homo sapiens
CLYBL_HUMAN / Q8N0X4 Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Homo sapiens (Human)
Q8N0X4 citrate (pro-3S)-lyase (EC 4.1.3.6) from Homo sapiens
PFams: HpcH_HpaI
340 amino acids: PaperBLAST, CDD, Compare to cluster
CLYBL_MOUSE / Q8R4N0 Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein, mitochondrial; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Mus musculus (Mouse)
Q8R4N0 citrate (pro-3S)-lyase (EC 4.1.3.6) from Mus musculus
PFams: HpcH_HpaI, C-C_Bond_Lyase
338 amino acids: PaperBLAST, CDD, Compare to cluster
ACEB_HALVD / D4GTL2 Malate synthase; MSH; EC 2.3.3.9 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii)
D4GTL2 malate synthase (EC 2.3.3.9) from Haloferax volcanii
PFams: HpcH_HpaI
433 amino acids: PaperBLAST, CDD
Q97YI7 malate synthase subunit (EC 2.3.3.9) from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Q97YI7 malate synthase (EC 2.3.3.9) from Saccharolobus solfataricus
PFams: Malate_synthase
826 amino acids: PaperBLAST, CDD
GCP_CAEEL / Q10663 Bifunctional glyoxylate cycle protein; Gex-3-interacting protein 7; EC 4.1.3.1; EC 2.3.3.9 from Caenorhabditis elegans
PFams: ICL, PEP_mutase, ICL, Malate_synthase
968 amino acids: PaperBLAST, CDD