Other Characterized Proteins Similar to gtsA

Finding the characterized proteins for gtsA (xylose ABC transporter, periplasmic substrate-binding component GtsA) in D-xylose catabolism

Or see clustering for step gtsA

Or see all steps for D-xylose catabolism

Or cluster curated proteins matching a keyword

Definition of gtsA

• Curated sequence GFF4324: ABC transporter for D-Glucose-6-Phosphate, periplasmic substrate-binding component
• Ignore hits to Q88P38 when looking for 'other' hits (GtsA (GLcE), component of Glucose porter, GtsABCD)
• Comment: GtsABCD from P. fluorescens WCS417 (PS417_22130:PS417_22145) is very important for utilization of both glycose and xylose. Similar systems in other Pseudomonas have been reported as glucose transporters. In P. putida, after enzymes for xylose catabolism were introduced and the strain was evolved for growth on xylose, GtsABCD were required for xylose utilization, although there were two point mutations in GtsA, so it is not certain if the wild-type P. putida GtsA binds xylose efficiently (see PMC3340264). The P. putida system is marked ignore. GtsA = PS417_22145 = GFF4324

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 2 other characterized sequences. (Found 3 hits including self hits.)

Removing ignored items reduces this to 1 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for gtsA.)

PfGW456L13_1894 ABC transporter for D-Galactose and D-Glucose, periplasmic substrate-binding component from Pseudomonas fluorescens GW456-L13
Heteromeric, 432 amino acids: PaperBLAST, CDD, reanno::pseudo13_GW456_L13:PfGW456L13_1894
79% identical to

PS417_22145 ABC transporter for D-Glucose-6-Phosphate, periplasmic substrate-binding component from Pseudomonas simiae WCS417
Heteromeric, 428 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for gtsA.)

TC 3.A.1.1.30 / Q88P38 GtsA (GLcE), component of Glucose porter, GtsABCD from Pseudomonas putida (strain KT2440)
Heteromeric, 428 amino acids: PaperBLAST, CDD, TCDB::Q88P38
87% identical to

PS417_22145 ABC transporter for D-Glucose-6-Phosphate, periplasmic substrate-binding component from Pseudomonas simiae WCS417
Heteromeric, 428 amino acids: PaperBLAST, CDD