Other Characterized Proteins Similar to xad

GapMind for catabolism of small carbon sources

Other Characterized Proteins Similar to xad

Finding the characterized proteins for xad (D-xylonate dehydratase) in D-xylose catabolism

Or see clustering for step xad

Or see all steps for D-xylose catabolism

Or cluster curated proteins matching a keyword

Definition of xad

Curated proteins or TIGRFams with EC 4.2.1.82
UniProt sequence D8IWS7_HERSS: SubName: Full=Dihydroxyacid dehydratase/phosphogluconate dehydratase protein {ECO:0000313|EMBL:ADJ65964.1}; EC=4.2.1.9 {ECO:0000313|EMBL:ADJ65964.1};
Comment: Watanabe et al (PMC6336799) show that C785_RS00855 = WP_039783171.1 = UPI0004007277 is D-xylonate dehydratase (xad); this is 98% identical to D8IWS7_HERSS, so use that identifier.

Fetched 9 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 16 other characterized sequences. (Found 24 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for xad.)

D4GYD4 gluconate dehydratase (EC 4.2.1.39) from Haloferax volcanii
PFams: MR_MLE_N, MR_MLE_C
412 amino acids: PaperBLAST, CDD, BRENDA::D4GYD4
77% identical to

D4GP40 D-xylonate dehydratase subunit (EC 4.2.1.82) from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
XAD_HALVD / D4GP40 D-xylonate dehydratase; XAD; EC 4.2.1.82 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii)
D4GP40 xylonate dehydratase (EC 4.2.1.82) from Haloferax volcanii
PFams: MR_MLE_N, MR_MLE_C
412 amino acids: PaperBLAST, CDD

GAD_SACS2 / Q97U27 D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus)
Q97U27 gluconate/galactonate dehydratase (EC 4.2.1.140) from Saccharolobus solfataricus
PFams: MR_MLE_N, MR_MLE_C
395 amino acids: PaperBLAST, CDD, BRENDA::Q97U27
62% identical to

Q97VG1 D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
PFams: MR_MLE_N, MR_MLE_C
393 amino acids: PaperBLAST, CDD

GAD_THETE / Q704D2 D-gluconate dehydratase; EC 4.2.1.39 from Thermoproteus tenax
PFams: MR_MLE_N, MR_MLE_C
497 amino acids: PaperBLAST, CDD, SwissProt::Q704D2
53% identical to

G4RJQ1 gluconate dehydratase (EC 4.2.1.39) from Thermoproteus tenax
PFams: MR_MLE_N, MR_MLE_C
391 amino acids: PaperBLAST, CDD, BRENDA::G4RJQ1
53% identical to

SM_b20890 L-arabonate dehydratase (EC 4.2.1.25) from Sinorhizobium meliloti 1021
PFams: ILVD_EDD
579 amino acids: PaperBLAST, CDD, reanno::Smeli:SM_b20890
45% identical to

AO356_28760 Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens FW300-N2C3
PFams: ILVD_EDD
594 amino acids: PaperBLAST, CDD

ARAD_RHILW / B5ZZ34 L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum bv. trifolii (strain WSM2304)
I9XDU6 L-Arabinonate dehydratase (EC 4.2.1.25) from Rhizobium leguminosarum bv. trifolii
PFams: ILVD_EDD
579 amino acids: PaperBLAST, CDD, SwissProt::B5ZZ34
46% identical to

AO356_28760 Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens FW300-N2C3
PFams: ILVD_EDD
594 amino acids: PaperBLAST, CDD

BPHYT_RS19730 L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans PsJN
PFams: ILVD_EDD
577 amino acids: PaperBLAST, CDD, reanno::BFirm:BPHYT_RS19730
44% identical to

Pf6N2E2_1668 Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens FW300-N2E2
PFams: ILVD_EDD
594 amino acids: PaperBLAST, CDD

GAD_PICTO / Q6L1T2 D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828)
Q6L1T2 gluconate/galactonate dehydratase (EC 4.2.1.140); gluconate dehydratase (EC 4.2.1.39) from Picrophilus torridus
PFams: MR_MLE_N, MR_MLE_C
391 amino acids: PaperBLAST, CDD, BRENDA::Q6L1T2
44% identical to

Pf6N2E2_609 L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens FW300-N2E2
PFams: ILVD_EDD
578 amino acids: PaperBLAST, CDD, reanno::pseudo6_N2E2:Pf6N2E2_609
43% identical to

Pf6N2E2_1668 Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens FW300-N2E2
PFams: ILVD_EDD
594 amino acids: PaperBLAST, CDD

PS417_11000 L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas simiae WCS417
PFams: ILVD_EDD
578 amino acids: PaperBLAST, CDD, reanno::WCS417:GFF2156
43% identical to

Pf6N2E2_1668 Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens FW300-N2E2
PFams: ILVD_EDD
594 amino acids: PaperBLAST, CDD

AO356_24585 L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens FW300-N2C3
PFams: ILVD_EDD
578 amino acids: PaperBLAST, CDD, reanno::pseudo5_N2C3_1:AO356_24585
43% identical to

Pf6N2E2_1668 Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens FW300-N2E2
PFams: ILVD_EDD
594 amino acids: PaperBLAST, CDD

PfGW456L13_3320 L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens GW456-L13
PFams: ILVD_EDD
578 amino acids: PaperBLAST, CDD, reanno::pseudo13_GW456_L13:PfGW456L13_3320
43% identical to

Pf6N2E2_1668 Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens FW300-N2E2
PFams: ILVD_EDD
594 amino acids: PaperBLAST, CDD

ILVD1_RHIME / Q92RP0 Putative dehydratase IlvD1; EC 4.2.1.- from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
PFams: ILVD_EDD
574 amino acids: PaperBLAST, CDD, SwissProt::Q92RP0
42% identical to

AO356_28760 Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens FW300-N2C3
PFams: ILVD_EDD
594 amino acids: PaperBLAST, CDD

Shewana3_2070 L-arabonate dehydratase (EC 4.2.1.25) from Shewanella sp. ANA-3
PFams: ILVD_EDD
586 amino acids: PaperBLAST, CDD, reanno::ANA3:7024896
42% identical to

AO356_28760 Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens FW300-N2C3
PFams: ILVD_EDD
594 amino acids: PaperBLAST, CDD

ARADA_AZOBR / Q1JUQ1 L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense
PFams: ILVD_EDD
583 amino acids: PaperBLAST, CDD, SwissProt::Q1JUQ1
42% identical to

AO356_28760 Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens FW300-N2C3
PFams: ILVD_EDD
594 amino acids: PaperBLAST, CDD

HSERO_RS05205 L-arabonate dehydratase (EC 4.2.1.25) from Herbaspirillum seropedicae SmR1
PFams: ILVD_EDD
585 amino acids: PaperBLAST, CDD, reanno::HerbieS:HSERO_RS05205
42% identical to

AO356_28760 Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens FW300-N2C3
PFams: ILVD_EDD
594 amino acids: PaperBLAST, CDD