Clusters of Characterized Proteins

GapMind for catabolism of small carbon sources

Clusters of Characterized Proteins

Clustering the characterized proteins for xylB (xylulokinase) in D-xylose catabolism

Or see other characterized proteins similar to xylB

Or see all steps for D-xylose catabolism

Or cluster curated proteins matching a keyword

Definition of xylB

Curated proteins or TIGRFams with EC 2.7.1.17
UniProt sequence L0FZT0: SubName: Full=Pentulose/hexulose kinase {ECO:0000313|EMBL:AGA78130.1};
UniProt sequence Q97FW4: RecName: Full=Xylulose kinase {ECO:0000256|HAMAP-Rule:MF_02220, ECO:0000256|RuleBase:RU364073}; Short=Xylulokinase {ECO:0000256|HAMAP-Rule:MF_02220, ECO:0000256|RuleBase:RU364073}; EC=2.7.1.17 {ECO:0000256|HAMAP-Rule:MF_02220, ECO:0000256|RuleBase:RU364073};
UniProt sequence Q8A9M3: SubName: Full=Xylulose kinase (Xylulokinase) {ECO:0000313|EMBL:AAO75899.1};
Comment: Echvi_1875 (L0FZT0) is annotated as xylulose kinase and has its strongest phentoypes on xylose. CA_C2612 (Q97FW4) from Clostridium acetobutylicum was proven to be xylulose kinase (PMC2873477). BT0792 (Q8A9M3) has its strongest phenotypes on xylose.

Fetched 21 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 21 of these sequences

Found 2 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 478-502 amino acids (not heteromeric)

Q9WXX1 xylulokinase (EC 2.7.1.17) from Thermotoga maritima
PFams: FGGY_N, FGGY_C
492 amino acids: PaperBLAST, CDD, Compare to cluster

b3564 xylulokinase (EC 2.7.1.17) from Escherichia coli K-12 substr. MG1655
P09099 xylulokinase (EC 2.7.1.17) from Escherichia coli (strain K12)
XYLB_ECOLI / P09099 Xylulose kinase; XK; Xylulokinase; 1-deoxy-D-xylulokinase; EC 2.7.1.17; EC 2.7.1.- from Escherichia coli (strain K12)
GB|AAC76588.1 xylulokinase; EC 2.7.1.17 from Escherichia coli K12
PFams: FGGY_N, FGGY_C
484 amino acids: PaperBLAST, CDD, Compare to cluster

XYLB_LACBR / P35850 Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Lactobacillus brevis
PFams: FGGY_N, FGGY_C
502 amino acids: PaperBLAST, CDD, Compare to cluster

L0FZT0 Pentulose/hexulose kinase
496 amino acids: PaperBLAST, CDD, Compare to cluster

Q8A9M3 Xylulose kinase (Xylulokinase)
497 amino acids: PaperBLAST, CDD, Compare to cluster

Q97FW4 Xylulose kinase {ECO:0000256|HAMAP-Rule:MF_02220, ECO:0000256|RuleBase:RU364073}; Short=Xylulokinase {ECO:0000256|HAMAP-Rule:MF_02220, ECO:0000256|RuleBase:RU364073}; EC=2.7.1.17 {ECO:0000256|HAMAP-Rule:MF_02220, ECO:0000256|RuleBase:RU364073}
500 amino acids: PaperBLAST, CDD, Compare to cluster

Dshi_1997 Xylulose kinase (EC 2.7.1.17) from Dinoroseobacter shibae DFL-12
PFams: FGGY_N, FGGY_C
480 amino acids: PaperBLAST, CDD, Compare to cluster

BWI76_RS27020 Xylulose kinase (EC 2.7.1.17) from Klebsiella michiganensis M5al
PFams: FGGY_N, FGGY_C
484 amino acids: PaperBLAST, CDD, Compare to cluster

PGA1_c14010 Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens BS107
PFams: FGGY_N, FGGY_C
478 amino acids: PaperBLAST, CDD, Compare to cluster

SMc03164 Xylulose kinase (EC 2.7.1.17) from Sinorhizobium meliloti 1021
PFams: FGGY_N, FGGY_C
484 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_27695 Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens FW300-N2C3
PFams: FGGY_N, FGGY_C
495 amino acids: PaperBLAST, CDD, Compare to cluster

Pf6N2E2_805 Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens FW300-N2E2
PFams: FGGY_N, FGGY_C
495 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 490-616 amino acids (not heteromeric)

F6JVF3 xylulokinase (EC 2.7.1.17) from Kluyveromyces marxianus
PFams: FGGY_N, FGGY_C
602 amino acids: PaperBLAST, CDD, Compare to cluster

XYLB_HUMAN / O75191 Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Homo sapiens (Human)
O75191 xylulokinase (EC 2.7.1.17) from Homo sapiens
PFams: FGGY_N, FGGY_C
536 amino acids: PaperBLAST, CDD, Compare to cluster

Q4JHR4 xylulokinase (EC 2.7.1.17) from Candida maltosa
PFams: FGGY_N, FGGY_C
616 amino acids: PaperBLAST, CDD, Compare to cluster

W8VYH1 xylulokinase (EC 2.7.1.17) from Mucor circinelloides
PFams: FGGY_N, FGGY_C
521 amino acids: PaperBLAST, CDD, Compare to cluster

XKS1_YEAST / P42826 Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: FGGY_N, FGGY_N, FGGY_C
600 amino acids: PaperBLAST, CDD, Compare to cluster

Q8X167 D-xylulose kinase subunit (EC 2.7.1.17) from Aspergillus niger
XKS1_ASPNG / Q8X167 D-xylulose kinase A; Xylulokinase A; EC 2.7.1.17 from Aspergillus niger
PFams: FGGY_N, FGGY_N, FGGY_C
570 amino acids: PaperBLAST, CDD, Compare to cluster

XK2_ARATH / Q949W8 Xylulose kinase 2; Atxk-2; Xylulokinase 2; 1-Deoxy-D-Xylulokinase; DXK; EC 2.7.1.17 from Arabidopsis thaliana (Mouse-ear cress)
PFams: FGGY_N, FGGY_C
558 amino acids: PaperBLAST, CDD, Compare to cluster

XKS1_SCHPO / Q9C0U6 Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
PFams: FGGY_N, FGGY_C
555 amino acids: PaperBLAST, CDD, Compare to cluster

Q3SYZ6 D-xylulokinase (EC 2.7.1.17) from Bos taurus
PFams: FGGY_N, FGGY_C
490 amino acids: PaperBLAST, CDD, Compare to cluster